RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SLC2A12Q8TD20 617 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 MS4A6EQ96DS6 147 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 RUNDC3BQ96NL0 473 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 AICDAQ9GZX7 198 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 EPB41L4BQ9H329 900 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 ZNF703Q9H7S9 590 aaPredicted RBP13.34□□□□□ -0.27
SMC1A-204ENST00000463684 QPCTLQ9NXS2 382 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 COPS7AQ9UBW8 275 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 SLC22A14Q9Y267 594 aa13.34□□□□□ -0.27
SMC1A-204ENST00000463684 HRNRQ86YZ3 2850 aaPredicted RBP13.34□□□□□ -0.27
SMC1A-204ENST00000463684 C15orf38-AP3S2A0A0A6YYH1 394 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 LRIT2A6NDA9 550 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 CYR61O00622 381 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 CES2O00748 559 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 ZNF354AO60765 605 aaPredicted RBP13.33□□□□□ -0.28
SMC1A-204ENST00000463684 FGGP02679 453 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 RFPL3SP0C7P2 107 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 HNRNPH1P31943 449 aaKnown RBP13.33□□□□□ -0.28
SMC1A-204ENST00000463684 TRPC1P48995 793 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 PLA2G16P53816 162 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 SORDQ00796 357 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 ASPHQ12797 758 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 SERTAD2Q14140 314 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 MPEG1Q2M385 716 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 ACSF3Q4G176 576 aaPredicted RBP13.33□□□□□ -0.28
SMC1A-204ENST00000463684 RBM20Q5T481 1227 aaKnown RBP13.33□□□□□ -0.28
SMC1A-204ENST00000463684 TRIM40Q6P9F5 258 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 KRTAP1-3Q8IUG1 177 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMC1A-204ENST00000463684 SLC22A8Q8TCC7 542 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 KIAA1191Q96A73 305 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 HSPBAP1Q96EW2 488 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 JSRP1Q96MG2 331 aaPredicted RBP13.33□□□□□ -0.28
SMC1A-204ENST00000463684 SERPINB12Q96P63 405 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 SLC6A15Q9H2J7 730 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 COPS7BQ9H9Q2 264 aaPredicted RBP13.33□□□□□ -0.28
SMC1A-204ENST00000463684 GUCA1BQ9UMX6 200 aa13.33□□□□□ -0.28
SMC1A-204ENST00000463684 ANKDD1BA6NHY2 528 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 EEF1E1-BLOC1S5C9J1V9 151 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 EEF1E1O43324 174 aaKnown RBP13.32□□□□□ -0.28
SMC1A-204ENST00000463684 KRT14P02533 472 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 C1GALT1C1LP0DN25 315 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 GSTM2P28161 218 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 MTTPP55157 894 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 LIM2P55344 173 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 WNT3P56703 355 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 PPP2R2BQ00005 443 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 ZNF791Q3KP31 576 aaPredicted RBP13.32□□□□□ -0.28
SMC1A-204ENST00000463684 PRAMEF20Q5VT98 475 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 POMZP3Q6PJE2 187 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 CXXC5Q7LFL8 322 aaKnown RBP13.32□□□□□ -0.28
SMC1A-204ENST00000463684 PM20D2Q8IYS1 436 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 KRT78Q8N1N4 520 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 LRRC25Q8N386 305 aaPredicted RBP13.32□□□□□ -0.28
SMC1A-204ENST00000463684 C7orf57Q8NEG2 295 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 OR2L5Q8NG80 312 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 PAQR8Q8TEZ7 354 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 QRFPRQ96P65 431 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 REXO4Q9GZR2 422 aaKnown RBP13.32□□□□□ -0.28
SMC1A-204ENST00000463684 TRMT1Q9NXH9 659 aaKnown RBP13.32□□□□□ -0.28
SMC1A-204ENST00000463684 CNIH4Q9P003 139 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 DAPP1Q9UN19 280 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 DNAJC13O75165 2243 aa13.32□□□□□ -0.28
SMC1A-204ENST00000463684 CASKO14936 926 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 AHSGP02765 367 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 COX7A2P14406 83 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 GNAZP19086 355 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 GDF1P27539 372 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 OPRM1P35372 400 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 ZNF75DP51815 510 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 ZNF136P52737 540 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 TGM3Q08188 693 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 DUSP8Q13202 625 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 POU4F3Q15319 338 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 DND1Q8IYX4 353 aaKnown RBP13.31□□□□□ -0.28
SMC1A-204ENST00000463684 RASGEF1CQ8N431 466 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 SLC15A4Q8N697 577 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 SIMC1Q8NDZ2 872 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 FAM13CQ8NE31 585 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 NUBPLQ8TB37 319 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 COX4I2Q96KJ9 171 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 SIGLEC10Q96LC7 697 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 CSF3RQ99062 836 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 TIMP4Q99727 224 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 EGFL8Q99944 293 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 BDH2Q9BUT1 245 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 SH2D2AQ9NP31 389 aa13.31□□□□□ -0.28
SMC1A-204ENST00000463684 NSD1Q96L73 2696 aaPredicted RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 KDM4EB2RXH2 506 aaPredicted RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 H7C1Q1 480 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 DYRK3O43781 588 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 SMPD2O60906 423 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 LDB3O75112 727 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 CLEC3AO75596 197 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 TRAPPC6AO75865 159 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 ETHE1O95571 254 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 HRGP04196 525 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 CCDC175P0C221 793 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms