RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PTBP2Q9UKA9 531 aaKnown RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 PCTPQ9UKL6 214 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 USP22Q9UPT9 525 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 SLC17A4Q9Y2C5 497 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CA5BQ9Y2D0 317 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 PCYT1BQ9Y5K3 369 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CACNA1IQ9P0X4 2223 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 LRRK1Q38SD2 2015 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 TMEM221A6NGB7 291 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 CCT8L1PA6NM43 557 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 C10orf142B7Z368 130 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 SLCO1B7G3V0H7 640 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 PRAMEF26H0Y7S4 382 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 H0YIZ8 118 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 M0R296 226 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 PPP6CO00743 305 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 UBFD1O14562 309 aaKnown RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 TAPBPO15533 448 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 PSIP1O75475 530 aaKnown RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 MLYCDO95822 493 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 ONECUT2O95948 504 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 CATP04040 527 aaKnown RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 IGHV4-34P06331 123 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 DCNP07585 359 aaKnown RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 RPS17P08708 135 aaKnown RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 KELP23276 732 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 EPHA3P29320 983 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 NUDT1P36639 197 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 CXCL12P48061 93 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 HSPA7P48741 367 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 KIAA1024LP59773 190 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 PFN3P60673 137 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 YPEL5P62699 121 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 IFT88Q13099 833 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 MTAPQ13126 283 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 RPA4Q13156 261 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 NFE2L1Q14494 772 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 C18orf21Q32NC0 220 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 PYCR3Q53H96 274 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 SH2D4BQ5SQS7 431 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 METTL2BQ6P1Q9 378 aaKnown RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 C6orf89Q6UWU4 347 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 ENPP7Q6UWV6 458 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 MBOAT1Q6ZNC8 495 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 GCNT7Q6ZNI0 430 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 FAM83HQ6ZRV2 1179 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 GALNT13Q8IUC8 556 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 RASGRP3Q8IV61 690 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 KIRREL3Q8IZU9 778 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 TCAIMQ8N3R3 496 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 FRMD1Q8N878 549 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 C11orf44Q8N8P7 122 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 OR56A4Q8NGH8 313 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 BIRC7Q96CA5 298 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 RHBDF1Q96CC6 855 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 RMDN2Q96LZ7 410 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 RILPQ96NA2 401 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 HGH1Q9BTY7 390 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 DPEP2Q9H4A9 486 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 SEMA4BQ9NPR2 832 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-204ENST00000462658 TM7SF3Q9NS93 570 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 ARL15Q9NXU5 204 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 WWOXQ9NZC7 414 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 HEY2Q9UBP5 337 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 SUFUQ9UMX1 484 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 SH2B3Q9UQQ2 575 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 TRPM6Q9BX84 2022 aa7.04□□□□□ -1.28
UBE4B-204ENST00000462658 ARHGEF33A8MVX0 844 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 AP4M1O00189 453 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 E2F3O00716 465 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF195O14628 629 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 HDAC3O15379 428 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 CCNT2O60583 730 aaKnown RBP7.03□□□□□ -1.28
UBE4B-204ENST00000462658 KCNJ13O60928 360 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 STK16O75716 305 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 DCTN3O75935 186 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 C1orf105O95561 183 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 FGF4P08620 206 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ACP5P13686 325 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 BMP5P22003 454 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ACADLP28330 430 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 GGT5P36269 586 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 BDKRB1P46663 353 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 GNPDA1P46926 289 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 RABIFP47224 123 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 HNMTP50135 292 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 TPTEP56180 551 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 AP1S2P56377 157 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 LCP2Q13094 533 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 GTF2H2Q13888 395 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 NFATC4Q14934 902 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 RBBP7Q16576 425 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 GTF2H2CQ6P1K8 395 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 TTC23LQ6PF05 361 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 EPGNQ6UW88 154 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 Q6ZSR6 202 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 Q6ZWC4 215 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 TRPM8Q7Z2W7 1104 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 GOLGA7Q7Z5G4 137 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms