RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SCYL1Q96KG9 808 aa14.26□□□□□ -0.13
SKA3-204ENST00000462482 ART5Q96L15 291 aa14.26□□□□□ -0.13
SKA3-204ENST00000462482 DGAT2Q96PD7 388 aa14.26□□□□□ -0.13
SKA3-204ENST00000462482 PRDM7Q9NQW5 492 aa14.26□□□□□ -0.13
SKA3-204ENST00000462482 PNPLA3Q9NST1 481 aa14.26□□□□□ -0.13
SKA3-204ENST00000462482 KCNN3Q9UGI6 736 aa14.26□□□□□ -0.13
SKA3-204ENST00000462482 HRH3Q9Y5N1 445 aa14.26□□□□□ -0.13
SKA3-204ENST00000462482 TEP1Q99973 2627 aaKnown RBP14.26□□□□□ -0.13
SKA3-204ENST00000462482 PINLYPA6NC86 204 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 LDB3O75112 727 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 TOXO94900 526 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 ZWINTO95229 277 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 CD1EP15812 388 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 CD1DP15813 335 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 HIST1H1TP22492 207 aaPredicted RBP14.25□□□□□ -0.13
SKA3-204ENST00000462482 ATP5A1P25705 553 aaKnown RBP14.25□□□□□ -0.13
SKA3-204ENST00000462482 SPRP35270 261 aaPredicted RBP14.25□□□□□ -0.13
SKA3-204ENST00000462482 GP5P40197 560 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 MAGEA5P43359 124 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 RAP1GDS1P52306 607 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 EMC4Q5J8M3 183 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 SPNS3Q6ZMD2 512 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 RAPH1Q70E73 1250 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 CREG2Q8IUH2 290 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 CTAGE3PQ8IX95 158 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 DMRTC2Q8IXT2 367 aaPredicted RBP14.25□□□□□ -0.13
SKA3-204ENST00000462482 TMEM251Q8N6I4 163 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 PDPRQ8NCN5 879 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 STAG3L4Q8TBR4 150 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 CMTM7Q96FZ5 175 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 GPR22Q99680 433 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 NAPGQ99747 312 aaPredicted RBP14.25□□□□□ -0.13
SKA3-204ENST00000462482 MAPKAP1Q9BPZ7 522 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 CD244Q9BZW8 370 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 SAYSD1Q9NPB0 183 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 MS4A12Q9NXJ0 267 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 RNF14Q9UBS8 474 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 ADGRE2Q9UHX3 823 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 PTBP2Q9UKA9 531 aaKnown RBP14.25□□□□□ -0.13
SKA3-204ENST00000462482 FBN2P35556 2912 aa14.25□□□□□ -0.13
SKA3-204ENST00000462482 ATP6AP2A0A1C7CYW4 349 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 EIF3HO15372 352 aaKnown RBP eCLIP14.24□□□□□ -0.13
SKA3-204ENST00000462482 SUSD5O60279 629 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 WDR1O75083 606 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 ATP6AP2O75787 350 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 GLSO94925 669 aaPredicted RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 TBX6O95947 436 aaPredicted RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 TGFB1P01137 390 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 IGHG3P01860 377 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 HOXD4P09016 255 aaPredicted RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 IGFBP2P18065 325 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 RPL21P46778 160 aaKnown RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 ZFP36L2P47974 494 aaKnown RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 DNASE1L1P49184 302 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 RAB10P61026 200 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 KCNJ2P63252 427 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 PHEXP78562 749 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 PLIN5Q00G26 463 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 ID2Q02363 134 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 ASPHQ12797 758 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 OR4D1Q15615 310 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 MPEG1Q2M385 716 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 SLC22A10Q63ZE4 541 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 ADNP2Q6IQ32 1131 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 TRILQ7L0X0 811 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 TBC1D1Q86TI0 1168 aaPredicted RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 RPRMLQ8N4K4 120 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 ZNF473Q8WTR7 871 aaKnown RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 RBBP8Q99708 897 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 TTYH2Q9BSA4 534 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 MS4A8Q9BY19 250 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 NMRAL1Q9HBL8 299 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 NPDC1Q9NQX5 325 aaPredicted RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 RYDENQ9NUL5 291 aaKnown RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 ALKBH4Q9NXW9 302 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 NUDT4Q9NZJ9 180 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 OPTCQ9UBM4 332 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 PHF11Q9UIL8 331 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 BOKQ9UMX3 212 aaPredicted RBP14.24□□□□□ -0.13
SKA3-204ENST00000462482 ANGPTL3Q9Y5C1 460 aa14.24□□□□□ -0.13
SKA3-204ENST00000462482 TRGV5A0A0B4J1U4 118 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 A0A0G2JMM0 328 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 A0A1B0GVC2 190 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 A0A1W2PPB8 328 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 A0A1W2PRS3 328 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 KIR3DP1A8MWS1 328 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 SUPT3HB4E1H0 165 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 RTCAO00442 366 aaKnown RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 AQP7O14520 342 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 HCN1O60741 890 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 SH3BGRLO75368 114 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 SUPT3HO75486 399 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 PIAS1O75925 651 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 GABRA1P14867 456 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 CD22P20273 847 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 SSTR1P30872 391 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 CASP2P42575 452 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 STT3AP46977 705 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 TESK1Q15569 626 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 PIGGQ5H8A4 983 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms