RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ETHE1O95571 254 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 MLYCDO95822 493 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 SNRPAP09012 282 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 COX7A2P14406 83 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF24P17028 368 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 GCAP28676 217 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 BUD31P41223 144 aaPredicted RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 HLCSP50747 726 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 GPR143P51810 404 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ARFIP1P53367 373 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 HNRNPH2P55795 449 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ALDH6A1Q02252 535 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 RBPJQ06330 500 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 TRAF3Q13114 568 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 SLAMF1Q13291 335 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ZRSR2Q15696 482 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 MAPKAPK3Q16644 382 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 GGTA1PQ4G0N0 100 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 HIST2H2BCQ6DN03 193 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 MAMDC2Q7Z304 686 aaPredicted RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 FJX1Q86VR8 437 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF227Q86WZ6 799 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 GSPT2Q8IYD1 628 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 CYP4Z2PQ8N1L4 340 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 TMEM156Q8N614 296 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 MORN4Q8NDC4 146 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 WDR20Q8TBZ3 569 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 SLC2A12Q8TD20 617 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 PTPMT1Q8WUK0 201 aaPredicted RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ATP6V1E2Q96A05 226 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 TMEM125Q96AQ2 219 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 MTBPQ96DY7 904 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 GPR137Q96N19 417 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 NSUN5Q96P11 429 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 MRPL57Q9BQC6 102 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ALOXE3Q9BYJ1 711 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 OR8D2Q9GZM6 311 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 TRIM45Q9H8W5 580 aaPredicted RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ZBTB26Q9HCK0 441 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 LYARQ9NX58 379 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 MS4A12Q9NXJ0 267 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 VTI1BQ9UEU0 232 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 A0A0A6YYD5 115 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 TRGV8A0A0C4DH27 118 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 A0A1B0GUH1 482 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 A8MT66 165 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 EEDO75530 441 aaKnown RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 SEMA3DO95025 777 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 CLDN1O95832 211 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 NR2F6P10588 404 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 TNNI3P19429 210 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 PTX3P26022 381 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 MEOX1P50221 254 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 SSR4P51571 173 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 NEK2P51955 445 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 IGLV3-21P80748 117 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 PLIN5Q00G26 463 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 FOLH1Q04609 750 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 CUL3Q13618 768 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 C10orf62Q5T681 223 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 LGSNQ5TDP6 509 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 FRG2Q64ET8 278 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 CYP20A1Q6UW02 462 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 HSDL2Q6YN16 418 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 C16orf47Q6ZP98 133 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 GPR180Q86V85 440 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 CPSF7Q8N684 471 aaKnown RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF321PQ8N8H1 164 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF483Q8TF39 744 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 ANKRD9Q96BM1 317 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 MAGED4Q96JG8 741 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 DGAT2Q96PD7 388 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 FRG2BQ96QU4 278 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 RPF2Q9H7B2 306 aaKnown RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 SEMA4BQ9NPR2 832 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 PSMC3IPQ9P2W1 217 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 COPS7AQ9UBW8 275 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 SH3BGRL2Q9UJC5 107 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 PPT2Q9UMR5 302 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 KLF13Q9Y2Y9 288 aaPredicted RBP9.46□□□□□ -0.9
SF3A3-204ENST00000462258 ATG4BQ9Y4P1 393 aa9.46□□□□□ -0.9
SF3A3-204ENST00000462258 IQANK1A0A1B0GTG1 560 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 TMEM200CA6NKL6 621 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 A8MVJ9 347 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 NPIPA5E9PKD4 350 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 FOXE1O00358 373 aaPredicted RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 DYRK3O43781 588 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 TMPRSS11DO60235 418 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 SLC19A2O60779 497 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 ZG16O60844 167 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 OR2J2O76002 312 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 AIFM1O95831 613 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 OTCP00480 354 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 SBK3P0C264 359 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 FAM153BP0C7A2 387 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 FAM58BPP0C7Q3 252 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 ALOX15P16050 662 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms