RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 PHC2Q8IXK0 858 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 THEM5Q8N1Q8 247 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 TRPV3Q8NET8 790 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 OR6F1Q8NGZ6 308 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 RPLP0P6Q8NHW5 317 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 GOLGA5Q8TBA6 731 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 SPATA18Q8TC71 538 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 SMPDL3AQ92484 453 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 HAS2Q92819 552 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 SLCO4A1Q96BD0 722 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 UBAC1Q9BSL1 405 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 ACAT2Q9BWD1 397 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 MARCH7Q9H992 704 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 NLGN3Q9NZ94 848 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 TSPAN16Q9UKR8 245 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 EXOC6BQ9Y2D4 811 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 MRPS2Q9Y399 296 aaKnown RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 SPAG9O60271 1321 aaKnown RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 FAM135BQ49AJ0 1406 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 MED14O60244 1454 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 DIP2CQ9Y2E4 1556 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 CEP170BQ9Y4F5 1589 aaPredicted RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 DEPDC5O75140 1603 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 DNMT1P26358 1616 aaKnown RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 HCFC1P51610 2035 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 IGHV4-30-2A0A087WSY4 118 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SLC28A1O00337 649 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 RTCAO00442 366 aaKnown RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 SOCS3O14543 225 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 INPP4BO15327 924 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SIGLEC5O15389 551 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 STBD1O95210 358 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 CPNE6O95741 557 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 EPOP01588 193 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SBK2P0C263 348 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SKILP12757 684 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 CPA3P15088 417 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 GLRA1P23415 457 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 PDHA2P29803 388 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 FHITP49789 147 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 EVCP57679 992 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 HILS1P60008 231 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 ERVK11-1P61568 191 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 RIGQ13278 110 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 PDE7AQ13946 482 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 GCKRQ14397 625 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 OR1C1Q15619 314 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 C3AR1Q16581 482 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 HFEQ30201 348 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 FASTKD1Q53R41 847 aaKnown RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 ALKBH5Q6P6C2 394 aaKnown RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 METTL7BQ6UX53 244 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 TMEM64Q6YI46 380 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 CACUL1Q86Y37 369 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 OR4N5Q8IXE1 308 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 METTL4Q8N3J2 472 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SFRP1Q8N474 314 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 CLEC1AQ8NC01 280 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SPPL2AQ8TCT8 520 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 LRRC15Q8TF66 581 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SNX21Q969T3 373 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 CNRIP1Q96F85 164 aaPredicted RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 PRICKLE1Q96MT3 831 aaPredicted RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 AGAP4Q96P64 663 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 NAP1L3Q99457 506 aaPredicted RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 SPAG8Q99932 426 aaPredicted RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 SYT11Q9BT88 431 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 MTIF3Q9H2K0 278 aaKnown RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 ZNF665Q9H7R5 613 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 DBNDD1Q9H9R9 158 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 ACOXLQ9NUZ1 547 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 PLEK2Q9NYT0 353 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 IL19Q9UHD0 177 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 TRMT6Q9UJA5 497 aaKnown RBP3.32□□□□□ -1.88
FN1-215ENST00000461974 RNF215Q9Y6U7 377 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 LRRC7Q96NW7 1537 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 SYNMO15061 1565 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 LRP5O75197 1615 aa3.32□□□□□ -1.88
FN1-215ENST00000461974 MLH3Q9UHC1 1453 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 PLCH2O75038 1416 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 SCAPERQ9BY12 1400 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 BCLAF3A2AJT9 711 aaKnown RBP3.31□□□□□ -1.88
FN1-215ENST00000461974 ARPC1BO15143 372 aaKnown RBP3.31□□□□□ -1.88
FN1-215ENST00000461974 ZBTB14O43829 449 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 SFTPBP07988 381 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 ABHD2P08910 425 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 THEGLP0DJG4 465 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 DPEP1P16444 411 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 FERP16591 822 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 STMN1P16949 149 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 CLK1P49759 484 aaKnown RBP3.31□□□□□ -1.88
FN1-215ENST00000461974 NT5C2P49902 561 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 CASP9P55211 416 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 STARD6P59095 220 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 ABCE1P61221 599 aaKnown RBP3.31□□□□□ -1.88
FN1-215ENST00000461974 AP1B1Q10567 949 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 CBX3Q13185 183 aa3.31□□□□□ -1.88
FN1-215ENST00000461974 KIAA0141Q14154 515 aaPredicted RBP3.31□□□□□ -1.88
FN1-215ENST00000461974 GIT2Q14161 759 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms