RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TRADDQ15628 312 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 SYT10Q6XYQ8 523 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 C16orf47Q6ZP98 133 aaPredicted RBP21.14■□□□□ 0.97
PTPN4-207ENST00000460162 NCCRP1Q6ZVX7 275 aaPredicted RBP21.14■□□□□ 0.97
PTPN4-207ENST00000460162 SLC2A12Q8TD20 617 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 KCTD4Q8WVF5 259 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 NXNL1Q96CM4 212 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 CENPKQ9BS16 269 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 MS4A12Q9NXJ0 267 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 COPS7AQ9UBW8 275 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 TSC22D4Q9Y3Q8 395 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.14■□□□□ 0.97
PTPN4-207ENST00000460162 ACOT7O00154 380 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 CDC40O60508 579 aaKnown RBP eCLIP21.13■□□□□ 0.97
PTPN4-207ENST00000460162 OR6B1O95007 311 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 TGFB1P01137 390 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 COX7A2P14406 83 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 TNNI3P19429 210 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 PIK3CBP42338 1070 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 ARFIP1P53367 373 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 RNF4P78317 190 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 CDSNQ15517 529 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 FAM83EQ2M2I3 478 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 ARHGAP11AQ6P4F7 1023 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 CD163Q86VB7 1156 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 OR5L2Q8NGL0 311 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 LIN28AQ9H9Z2 209 aaKnown RBP21.13■□□□□ 0.97
PTPN4-207ENST00000460162 DMRT3Q9NQL9 472 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 SNX15Q9NRS6 342 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 DEPPQ9NTK1 212 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 PPT2Q9UMR5 302 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 ANGPTL3Q9Y5C1 460 aa21.13■□□□□ 0.97
PTPN4-207ENST00000460162 ADGRG4Q8IZF6 3080 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 WWP2O00308 870 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 TPOP07202 933 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 STT3AP46977 705 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 RAP1GDS1P52306 607 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 PHEXP78562 749 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 IRF9Q00978 393 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 CKAP4Q07065 602 aaKnown RBP21.12■□□□□ 0.97
PTPN4-207ENST00000460162 DDX39BQ13838 428 aaKnown RBP21.12■□□□□ 0.97
PTPN4-207ENST00000460162 DEPDC1Q5TB30 811 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 LIPJQ5W064 366 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 OR4C11Q6IEV9 310 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 C8orf74Q6P047 294 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 IL20RBQ6UXL0 311 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 C3P1Q6ZMU1 363 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 RTL4Q6ZR62 310 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 RGS9BPQ6ZS82 235 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 C17orf53Q8N3J3 647 aaPredicted RBP21.12■□□□□ 0.97
PTPN4-207ENST00000460162 ZCCHC7Q8N3Z6 543 aaKnown RBP21.12■□□□□ 0.97
PTPN4-207ENST00000460162 TEX9Q8N6V9 391 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 ZNF321PQ8N8H1 164 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 GOLM1Q8NBJ4 401 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 OR2M7Q8NG81 312 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 HUS1BQ8NHY5 278 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 ANKRD9Q96BM1 317 aaPredicted RBP21.12■□□□□ 0.97
PTPN4-207ENST00000460162 TRIM8Q9BZR9 551 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 OR51B5Q9H339 312 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 PHF11Q9UIL8 331 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 PCDHGA11Q9Y5H2 935 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 DCHS2Q6V1P9 2916 aa21.12■□□□□ 0.97
PTPN4-207ENST00000460162 OTOGQ6ZRI0 2925 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 MYOCOSA0A1B0GUC4 107 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ESYT3A0FGR9 886 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 SAP18O00422 153 aaKnown RBP21.11■□□□□ 0.97
PTPN4-207ENST00000460162 FGF17O60258 216 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 UGDHO60701 494 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 SH3BGRLO75368 114 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 C2P06681 752 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 SNRPB2P08579 225 aaKnown RBP21.11■□□□□ 0.97
PTPN4-207ENST00000460162 GFAPP14136 432 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ALDH18A1P54886 795 aaKnown RBP21.11■□□□□ 0.97
PTPN4-207ENST00000460162 PLIN5Q00G26 463 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 TNFRSF17Q02223 184 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ID2Q02363 134 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 BIKQ13323 160 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ACAP2Q15057 778 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 MROH9Q5TGP6 573 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 KLC3Q6P597 504 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 PAOXQ6QHF9 649 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 OPN5Q6U736 354 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 GK5Q6ZS86 529 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 MYLK4Q86YV6 388 aaPredicted RBP21.11■□□□□ 0.97
PTPN4-207ENST00000460162 OR52N2Q8NGI0 321 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ZNF721Q8TF20 911 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 RGMAQ96B86 450 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 REPS1Q96D71 796 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ART5Q96L15 291 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 DGAT2Q96PD7 388 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ACTR8Q9H981 624 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 ZDHHC18Q9NUE0 388 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 COQ3Q9NZJ6 369 aa21.11■□□□□ 0.97
PTPN4-207ENST00000460162 HMX2A2RU54 273 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 C19orf84I3L1E1 186 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 PLPP1O14494 284 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 DYRK3O43781 588 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 KLK8O60259 260 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 KLHL2O95198 593 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 ETHE1O95571 254 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms