RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 FCHO1O14526 889 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 TSPAN8P19075 237 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 IRX1P78414 480 aaPredicted RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 ZNF763Q0D2J5 394 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 TBL3Q12788 808 aaKnown RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 INAQ16352 499 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 SPDYAQ5MJ70 313 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 ATP1A1-AS1Q5TC04 95 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 ABHD17BQ5VST6 288 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 SHISA6Q6ZSJ9 500 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 DND1Q8IYX4 353 aaKnown RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 ST13P4Q8IZP2 240 aaPredicted RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 ANKRD42Q8N9B4 389 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 FAM47BQ8NA70 645 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 OR4K14Q8NGD5 310 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 MTFMTQ96DP5 389 aaKnown RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 MTERF3Q96E29 417 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 THOC3Q96J01 351 aaKnown RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 ACPTQ9BZG2 426 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 KCNK13Q9HB14 408 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 CLCA3PQ9Y6N3 262 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 USP34Q70CQ2 3546 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 TPRP12270 2363 aaKnown RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 TRPC5OSA6NMA1 111 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 BCAS2O75934 225 aaPredicted RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 IFNA16P05015 189 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 SLC35E2P0CK97 266 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 PRPS2P11908 318 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 CSNK2A2P19784 350 aaPredicted RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 SPRED3Q2MJR0 410 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 BTBD16Q32M84 506 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 ASB18Q6ZVZ8 466 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 R3HCC1LQ7Z5L2 792 aaKnown RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 HORMAD2Q8N7B1 307 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 B3GNT7Q8NFL0 401 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 RBM18Q96H35 190 aaKnown RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 ZNF717Q9BY31 904 aaPredicted RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 ENTPD4Q9Y227 616 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 GNG14A0A1W2PPG7 69 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 FOXO6A8MYZ6 492 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 RTCAO00442 366 aaKnown RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 TBX19O60806 448 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 LYPLA1O75608 230 aaPredicted RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 KLK1P06870 262 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 TNNI3P19429 210 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 TPP2P29144 1249 aaPredicted RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 MEP1AQ16819 746 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 SH2D4BQ5SQS7 431 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 B3GNTL1Q67FW5 361 aaPredicted RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 TMEM151BQ8IW70 566 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 PAIP2Q9BPZ3 127 aaKnown RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 ALOXE3Q9BYJ1 711 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 MED4Q9NPJ6 270 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 ZNF780BQ9Y6R6 833 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 TTC36A6NLP5 189 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 OR10H2O60403 315 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 PRR35P0CG20 571 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 SOX11P35716 441 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 SLC1A6P48664 564 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 HNRNPH2P55795 449 aaKnown RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 NR6A1Q15406 480 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 FAAH2Q6GMR7 532 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 ADNP2Q6IQ32 1131 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 LAPTM4BQ86VI4 370 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 DTWD1Q8N5C7 304 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 OR7G1Q8NGA0 311 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 ZFP28Q8NHY6 868 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 SUN3Q8TAQ9 357 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 WDR77Q9BQA1 342 aaPredicted RBP10.03□□□□□ -0.8
UBR4-208ENST00000459947 TIMM22Q9Y584 194 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 PTPRQQ9UMZ3 2332 aa10.03□□□□□ -0.8
UBR4-208ENST00000459947 MAP1BP46821 2468 aaKnown RBP10.02□□□□□ -0.8
UBR4-208ENST00000459947 DYTNA2CJ06 578 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 EEDO75530 441 aaKnown RBP10.02□□□□□ -0.81
UBR4-208ENST00000459947 ZFAND5O76080 213 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 AIFM1O95831 613 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 RPL14P50914 215 aaKnown RBP10.02□□□□□ -0.81
UBR4-208ENST00000459947 CPZQ66K79 652 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 H3F3CQ6NXT2 135 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 IGFL2Q6UWQ7 119 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 DDIASQ8IXT1 998 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 DYDC1Q8WWB3 177 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 TSLPQ969D9 159 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 CRELD1Q96HD1 420 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 FCRL1Q96LA6 429 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 MRPL1Q9BYD6 325 aaKnown RBP10.02□□□□□ -0.81
UBR4-208ENST00000459947 RBCK1Q9BYM8 510 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 ASIC5Q9NY37 505 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 EIF3LQ9Y262 564 aaKnown RBP10.02□□□□□ -0.81
UBR4-208ENST00000459947 SAP18O00422 153 aaKnown RBP10.02□□□□□ -0.81
UBR4-208ENST00000459947 UBFD1O14562 309 aaKnown RBP10.02□□□□□ -0.81
UBR4-208ENST00000459947 ANXA4P09525 319 aaPredicted RBP10.02□□□□□ -0.81
UBR4-208ENST00000459947 C19orf57Q0VDD7 668 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 ATP6AP1LQ52LC2 224 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 DEFB126Q9BYW3 111 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 NECTIN3Q9NQS3 549 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 TMPRSS11DO60235 418 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 SEC22BO75396 215 aa10.02□□□□□ -0.81
UBR4-208ENST00000459947 JRKO75564 520 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms