RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PDSS2Q86YH6 399 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 SPPL2CQ8IUH8 684 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 PSMA8Q8TAA3 256 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 NAT6Q93015 286 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 ANKHQ9HCJ1 492 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 NAALAD2Q9Y3Q0 740 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 ADAMTS20P59510 1910 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 GLOD5A6NK44 160 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 PGRMC2O15173 223 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 GSTA4O15217 222 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 GMNNO75496 209 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 CTSBP07858 339 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 UQCRC2P22695 453 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 SKP1P63208 163 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 HSD11B2P80365 405 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 CYP51A1Q16850 503 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 MTX3Q5HYI7 312 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 GARNL3Q5VVW2 1013 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 CPZQ66K79 652 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 USP53Q70EK8 1073 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 PRSS41Q7RTY9 318 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 ZNF551Q7Z340 670 aaPredicted RBP23.08■■□□□ 1.29
U2AF1-204ENST00000459639 NSMCE2Q96MF7 247 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 RAD21L1Q9H4I0 556 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 GIMAP4Q9NUV9 329 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 PSME2Q9UL46 239 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 ENTPD4Q9Y227 616 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 SPACA6W5XKT8 324 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 ASXL3Q9C0F0 2248 aa23.08■■□□□ 1.29
U2AF1-204ENST00000459639 CPED1A4D0V7 1026 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 MYO1GB0I1T2 1018 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 GALR2O43603 387 aaPredicted RBP23.07■■□□□ 1.28
U2AF1-204ENST00000459639 TLX1P31314 330 aaPredicted RBP23.07■■□□□ 1.28
U2AF1-204ENST00000459639 SOAT1P35610 550 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 SOX11P35716 441 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 POLE2P56282 527 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 IRAK1BP1Q5VVH5 260 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 OR52E8Q6IFG1 317 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 ERICH5Q6P6B1 374 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 PNPT1Q8TCS8 783 aaKnown RBP23.07■■□□□ 1.28
U2AF1-204ENST00000459639 AMDHD1Q96NU7 426 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 BBS4Q96RK4 519 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 GTPBP2Q9BX10 602 aaKnown RBP23.07■■□□□ 1.28
U2AF1-204ENST00000459639 CHST8Q9H2A9 424 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 CXorf36Q9H7Y0 433 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 GORASP2Q9H8Y8 452 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 ENAMQ9NRM1 1142 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 TMEM9Q9P0T7 183 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 UNC13CQ8NB66 2214 aa23.07■■□□□ 1.28
U2AF1-204ENST00000459639 ZNF860A6NHJ4 632 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 BAG2O95816 211 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 C1QCP02747 245 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 SLC7A1P30825 629 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 ARL4DP49703 201 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 RGNQ15493 299 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 CEBPEQ15744 281 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 PERM1Q5SV97 790 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 CLEC4FQ8N1N0 589 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 OR52N2Q8NGI0 321 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 N4BP2L2Q92802 583 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 C10orf90Q96M02 699 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 ARRDC1-AS1Q9H2J1 176 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 GLIPR2Q9H4G4 154 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 RPF2Q9H7B2 306 aaKnown RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 TTC28Q96AY4 2481 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 USP34Q70CQ2 3546 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 TCRBV5S2A0A599 114 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 FITM1A5D6W6 292 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 TOX3O15405 576 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 ERAL1O75616 437 aaKnown RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 KRT75O95678 551 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 GPIP06744 558 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 CHI3L1P36222 383 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 NUBP1P53384 320 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 EMP3P54852 163 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 SESN3P58005 492 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 OLR1P78380 273 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 VAC14Q08AM6 782 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 HSPB3Q12988 150 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 FADDQ13158 208 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 INAVAQ3KP66 663 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 ZC3H14Q6PJT7 736 aaKnown RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 D2HGDHQ8N465 521 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 OR52E4Q8NGH9 312 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 CNRIP1Q96F85 164 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 SLC41A2Q96JW4 573 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 NUDT22Q9BRQ3 303 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 EPS8L2Q9H6S3 715 aa23.06■■□□□ 1.28
U2AF1-204ENST00000459639 SIRT3Q9NTG7 399 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-204ENST00000459639 RNF103-CHMP3A0A140T963 221 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 WASHC1A8K0Z3 465 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 CXCR6O00574 342 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 KCNK5O95279 499 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 NTRK1P04629 796 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 UMPSP11172 480 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 CSNK2A2P19784 350 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-204ENST00000459639 GCKP35557 465 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 NCBP2P52298 156 aaKnown RBP eCLIP23.05■■□□□ 1.28
U2AF1-204ENST00000459639 MVDP53602 400 aa23.05■■□□□ 1.28
U2AF1-204ENST00000459639 FAM53BQ14153 422 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms