RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PNPLA2Q96AD5 504 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 FUBP3Q96I24 572 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNX27-204ENST00000458013 TXNRD2Q9NNW7 524 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 LRRN3E7EW58 273 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 CD9P21926 228 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 NDUFS1P28331 727 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 JAG1P78504 1218 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 OR10A4Q9H209 315 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 LRRN3Q9H3W5 708 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 TMEM248Q9NWD8 314 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 GPR52Q9Y2T5 361 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 C2orf78A6NCI8 922 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 YY2O15391 372 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 UQCRC2P22695 453 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 LRFN4Q6PJG9 635 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 ZNF773Q6PK81 442 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 THAP4Q8WY91 577 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 KCTD13Q8WZ19 329 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 CCDC106Q9BWC9 280 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 REEP4Q9H6H4 257 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 CRTAC1Q9NQ79 661 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 PEX12O00623 359 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 ZNF821O75541 412 aaPredicted RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 MOGSQ13724 837 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 SYT17Q9BSW7 474 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 FN3KQ9H479 309 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 TAS2R3Q9NYW6 316 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 MTMR11A4FU01 709 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 RTCAO00442 366 aaKnown RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 SNRPD2P62316 118 aaKnown RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 PITX1P78337 314 aaPredicted RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 EOGTQ5NDL2 527 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 SLC29A3Q9BZD2 475 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 OR51B6Q9H340 312 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 POT1Q9NUX5 634 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 CA14Q9ULX7 337 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 DHDHQ9UQ10 334 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 C12orf71A8MTZ7 269 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 AK4P27144 223 aaPredicted RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 RAB6CQ53S08 254 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 FAM46AQ96IP4 442 aaKnown RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 RAB6CQ9H0N0 254 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 TMED5Q9Y3A6 229 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 FLRT2O43155 660 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 TMEM69Q5SWH9 247 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 NEIL3Q8TAT5 605 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 PRR11Q96HE9 360 aaPredicted RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 DPCDQ9BVM2 203 aaPredicted RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 SERTAD3Q9UJW9 196 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 SDC3O75056 442 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 OAS1P00973 400 aaKnown RBP18.88■□□□□ 0.61
SNX27-204ENST00000458013 ZNF792Q3KQV3 632 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 FETUBQ9UGM5 382 aa18.88■□□□□ 0.61
SNX27-204ENST00000458013 ZNF763Q0D2J5 394 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 PAFAH1B3Q15102 231 aaKnown RBP18.87■□□□□ 0.61
SNX27-204ENST00000458013 CNKSR3Q6P9H4 555 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 GALNT6Q8NCL4 622 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 PLEKHO2Q8TD55 490 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 F2RL3Q96RI0 385 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 LRRC42Q9Y546 428 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 M0R233 179 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 SEC14L5O43304 696 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 EMX2Q04743 252 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.87■□□□□ 0.61
SNX27-204ENST00000458013 C3orf33Q6P1S2 294 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 PNPLA1Q8N8W4 532 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 MAL2Q969L2 176 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 IGSF8Q969P0 613 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 SLC39A1Q9NY26 324 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 ARL6IP5O75915 188 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 JMJD7P0C870 316 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 SERINC3Q13530 473 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 NIPAL1Q6NVV3 410 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 TMPRSS12Q86WS5 348 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 IQCF1Q8N6M8 205 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 TCEAL3Q969E4 200 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 KIAA1191Q96A73 305 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 TMEM125Q96AQ2 219 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 MKLN1Q9UL63 735 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 A0A1B0GVC2 190 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 CLCA1A8K7I4 914 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 PRAMEF11O60813 436 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 BCAS2O75934 225 aaPredicted RBP18.87■□□□□ 0.61
SNX27-204ENST00000458013 MFSD8Q8NHS3 518 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 HCN4Q9Y3Q4 1203 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 ZNF850A8MQ14 1090 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 EIF5AP63241 154 aaKnown RBP18.87■□□□□ 0.61
SNX27-204ENST00000458013 LMAN2Q12907 356 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 NPY5RQ15761 445 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 REEP3Q6NUK4 255 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 PTCHD1Q96NR3 888 aa18.87■□□□□ 0.61
SNX27-204ENST00000458013 FAM120CQ9NX05 1096 aaKnown RBP18.87■□□□□ 0.61
SNX27-204ENST00000458013 EEF1E1-BLOC1S5C9J1V9 151 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 SLITRK5O94991 958 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 ACRV1P26436 265 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 TEX19Q8NA77 164 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 OR4K14Q8NGD5 310 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 C5AR2Q9P296 337 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 MGAT4CQ9UBM8 478 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 FTSJ1Q9UET6 329 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms