RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SOX3P41225 446 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 DBPQ10586 325 aaPredicted RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 TSTQ16762 297 aaKnown RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 ZNF658BQ4V348 819 aaPredicted RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 CPTPQ5TA50 214 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 USP43Q70EL4 1123 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 TMPRSS11BQ86T26 416 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 TMIEQ8NEW7 156 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 ACAT2Q9BWD1 397 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 CHST8Q9H2A9 424 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 NEK6Q9HC98 313 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 DYRK4Q9NR20 520 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 KLHL3Q9UH77 587 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 TMED5Q9Y3A6 229 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 SDK1Q7Z5N4 2213 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 PRAMEF33A0A0G2JMD5 474 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 TFECO14948 347 aaPredicted RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 KIAA0513O60268 411 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 PRAMEF10O60809 474 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 C1orf105O95561 183 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 C6orf47O95873 294 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 CATP04040 527 aaKnown RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 JUPP14923 745 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 GDI1P31150 447 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 DRD3P35462 400 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 FADDQ13158 208 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 ZNF740Q8NDX6 193 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 WDR20Q8TBZ3 569 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 ZNF486Q96H40 463 aaPredicted RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 DOHHQ9BU89 302 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 RSPO3Q9BXY4 272 aaPredicted RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 PRRG3Q9BZD7 231 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 SPNS1Q9H2V7 528 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 CCNB1IP1Q9NPC3 277 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 C11orf16Q9NQ32 467 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 SPASTQ9UBP0 616 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 PCDHGA2Q9Y5H1 932 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 N6AMT1Q9Y5N5 214 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 HSPE1-MOB4S4R3N1 261 aa11.84□□□□□ -0.51
LINC00959-201ENST00000456581 MUC22E2RYF6 1773 aaPredicted RBP11.84□□□□□ -0.51
LINC00959-201ENST00000456581 PNMA8CA0A1B0GUJ8 204 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 SCAMP2O15127 329 aaKnown RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 MFN2O95140 757 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 PCDH8O95206 1070 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 PAPLNO95428 1278 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 TRPC1P48995 793 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 RGS6P49758 472 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 TAS2R38P59533 333 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 RPS13P62277 151 aaKnown RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 TBPL1P62380 186 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 ELP6Q0PNE2 266 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 PDGFRLQ15198 375 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 TCEA2Q15560 299 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 TAB1Q15750 504 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 RPS26P11Q5JNZ5 115 aaPredicted RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 RSBN1Q5VWQ0 802 aaPredicted RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 NRARPQ7Z6K4 114 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 SLC44A2Q8IWA5 706 aaPredicted RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 NRSN1Q8IZ57 195 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 KIAA1958Q8N8K9 716 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 IL17RDQ8NFM7 739 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 HUS1BQ8NHY5 278 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 CSGALNACT1Q8TDX6 532 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 NDEL1Q9GZM8 345 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 TMA7Q9Y2S6 64 aaKnown RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 IFT52Q9Y366 437 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 OR1A2Q9Y585 309 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 HEATR5BQ9P2D3 2071 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 RPLP0P05388 317 aaKnown RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 MAPK1P28482 360 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 MVDP53602 400 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 GGTA1PQ4G0N0 100 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 PIP5KL1Q5T9C9 394 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 TTC23LQ6PF05 361 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 PAQR6Q6TCH4 344 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 IPCEF1Q8WWN9 437 aaPredicted RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 MMP27Q9H306 513 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 EXOSC4Q9NPD3 245 aaKnown RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 MBNL1Q9NR56 388 aaKnown RBP11.83□□□□□ -0.52
LINC00959-201ENST00000456581 ADPRHL2Q9NX46 363 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 DUSP12Q9UNI6 340 aa11.83□□□□□ -0.52
LINC00959-201ENST00000456581 A0A1W2PPC1 479 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 FAM47E-STBD1D6RA91 191 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 H3BQ06 376 aaPredicted RBP11.82□□□□□ -0.52
LINC00959-201ENST00000456581 CCNKO75909 580 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 IDSP22304 550 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 TIE1P35590 1138 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
LINC00959-201ENST00000456581 SRSF11Q05519 484 aaKnown RBP11.82□□□□□ -0.52
LINC00959-201ENST00000456581 EIF4HQ15056 248 aaKnown RBP11.82□□□□□ -0.52
LINC00959-201ENST00000456581 TBCEQ15813 527 aaPredicted RBP11.82□□□□□ -0.52
LINC00959-201ENST00000456581 C2orf27AQ580R0 203 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 Q5BKY6 102 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 KIAA1211LQ6NV74 962 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 RNF165Q6ZSG1 346 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 OLIG3Q7RTU3 272 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 C11orf96Q7Z7L8 435 aa11.82□□□□□ -0.52
LINC00959-201ENST00000456581 ZNF605Q86T29 641 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms