RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 AHCTF1Q8WYP5 2266 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 AIM2O14862 343 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 DSCR3O14972 297 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SLC22A2O15244 555 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 HNRNPCL1O60812 293 aaKnown RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SCRG1O75711 98 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 PGRP06401 933 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 C8orf89P0DMQ9 161 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 COX7A2P14406 83 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 PRPS1L1P21108 318 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CPN2P22792 545 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CDKN2CP42773 168 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 RASSF2P50749 326 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 NCALDP61601 193 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 BTG2P78543 158 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 ID2Q02363 134 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TGM3Q08188 693 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TARDBPQ13148 414 aaKnown RBP eCLIP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 GARNL3Q5VVW2 1013 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 ZNF385CQ66K41 422 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 REP15Q6BDI9 236 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TLDC1Q6P9B6 456 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 COX15Q7KZN9 410 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 RAB11FIP2Q7L804 512 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 PPP1R3BQ86XI6 285 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TMEM126BQ8IUX1 230 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TTC29Q8NA56 475 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 RP9Q8TA86 221 aaKnown RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 DOK4Q8TEW6 326 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TESCQ96BS2 214 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 NDC1Q9BTX1 674 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TUBB6Q9BUF5 446 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TRIM4Q9C037 500 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SERHLQ9NQF3 203 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 FBXO8Q9NRD0 319 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SH3BP4Q9P0V3 963 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CLCA2Q9UQC9 943 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 A0A1W2PP18 115 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 DCDC2BA2VCK2 349 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 POLR1CO15160 346 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 LDB3O75112 727 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CNOT3O75175 753 aaKnown RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 KCNK5O95279 499 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 ESRRAP11474 423 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CEACAM1P13688 526 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 DDCP20711 480 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CALB2P22676 271 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 PRDX6P30041 224 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 S100A3P33764 101 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SOX18P35713 384 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CPOXP36551 454 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 ASMTP46597 345 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 MAPK10P53779 464 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CORO7P57737 925 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 KCNK10P57789 538 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TRA2BP62995 288 aaKnown RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SLC25A3Q00325 362 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TNFRSF17Q02223 184 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 ACTN3Q08043 901 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 NDUFA9Q16795 377 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 RSPO4Q2I0M5 234 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 FAM214AQ32MH5 1076 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 GTDC1Q4AE62 458 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 VWA2Q5GFL6 755 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 RHBDD2Q6NTF9 364 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 FAM199XQ6PEV8 388 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CLEC4FQ8N1N0 589 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 OR51Q1Q8NH59 317 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 DNAJB14Q8TBM8 379 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 GTF2H4Q92759 462 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 EXOSC8Q96B26 276 aaKnown RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CNRIP1Q96F85 164 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 LIN37Q96GY3 246 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 GBP5Q96PP8 586 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 OR52E6Q96RD3 313 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 MESP1Q9BRJ9 268 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SLC39A3Q9BRY0 314 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 IL1RL2Q9HB29 575 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 FANCEQ9HB96 536 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 LYRM4Q9HD34 91 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 MRGBPQ9NV56 204 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 LYARQ9NX58 379 aaKnown RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 SLC39A1Q9NY26 324 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 TAS2R1Q9NYW7 299 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 GMPR2Q9P2T1 348 aaKnown RBP10.35□□□□□ -0.75
SCN9A-205ENST00000454569 PISDQ9UG56 409 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CLDN16Q9Y5I7 305 aa10.35□□□□□ -0.75
SCN9A-205ENST00000454569 CELSR3Q9NYQ7 3312 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 FREM2Q5SZK8 3169 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 A0A1B0GX78 115 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 CCDC154A6NI56 674 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 B2RBV5 119 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 C9orf172C9J069 976 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 FXYD1O00168 92 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 FGF17O60258 216 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 PRMT3O60678 531 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 CDC123O75794 336 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-205ENST00000454569 DNAJC8O75937 253 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-205ENST00000454569 GSNP06396 782 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 PTPN6P29350 595 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms