RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ARHGEF15O94989 841 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 HOXD12P35452 270 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 MAGEA12P43365 314 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 RANBP10Q6VN20 620 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 ZNF783Q6ZMS7 281 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 UBQLNLQ8IYU4 475 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 SPARTQ8N0X7 666 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 RASGEF1AQ8N9B8 481 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 AVL9Q8NBF6 648 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 SNIP1Q8TAD8 396 aaKnown RBP11.57□□□□□ -0.56
SEC16A-207ENST00000453963 FCAMRQ8WWV6 532 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 TP63Q9H3D4 680 aaPredicted RBP11.57□□□□□ -0.56
SEC16A-207ENST00000453963 SLA2Q9H6Q3 261 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 WDR45Q9Y484 360 aa11.57□□□□□ -0.56
SEC16A-207ENST00000453963 EEF1E1O43324 174 aaKnown RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 CSN2P05814 226 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 HTR1AP08908 422 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 VAMP1P23763 118 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 EDNRBP24530 442 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ARSDP51689 593 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 CLCNKAP51800 687 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 E2F1Q01094 437 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 LRP8Q14114 963 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 GRK1Q15835 563 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 MAMDC4Q6UXC1 1216 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 TMED4Q7Z7H5 227 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 DTWD1Q8N5C7 304 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ZNF366Q8N895 744 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 STOML3Q8TAV4 291 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 TRIB2Q92519 343 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 SLC30A3Q99726 388 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 GSTO2Q9H4Y5 243 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 GNG8Q9UK08 70 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ZNF623O75123 536 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ADAP00813 363 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 GALTP07902 379 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 CXCR1P25024 350 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 EIF4HQ15056 248 aaKnown RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 PUS10Q3MIT2 529 aaKnown RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 LDLRAD1Q5T700 205 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 SLC25A25Q6KCM7 469 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 DCUN1D3Q8IWE4 304 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 TIGD4Q8IY51 512 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 PM20D2Q8IYS1 436 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 NELL2Q99435 816 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ALKBH4Q9NXW9 302 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 COPZ2Q9P299 210 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 INTS6Q9UL03 887 aaKnown RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 A0A0D9SEW6 157 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 PCDH17O14917 1159 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 COQ9O75208 318 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 H2AFB2P0C5Z0 115 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ZNF20P17024 532 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ENPP2Q13822 863 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 RAB6CQ53S08 254 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 GRASPQ7Z6J2 395 aaPredicted RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 VWA5B2Q8N398 1253 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 OR2T33Q8NG76 320 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 OR10T2Q8NGX3 314 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 CYB5D2Q8WUJ1 264 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 HMGB4Q8WW32 186 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 SECISBP2Q96T21 854 aaKnown RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 AIFM2Q9BRQ8 373 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 RAB6CQ9H0N0 254 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 METTL8Q9H825 291 aaKnown RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 PCDHGB2Q9Y5G2 931 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ZNF726A6NNF4 738 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 NDUFS4O43181 175 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 MMP20O60882 483 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ZNF821O75541 412 aaPredicted RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 PDHA2P29803 388 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 SLC5A2P31639 672 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ACTC1P68032 377 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 ACTA1P68133 377 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 GFOD2Q3B7J2 385 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 C22orf39Q6P5X5 142 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 DNM1P34Q6PK57 102 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 TSTD1Q8NFU3 115 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 SETD6Q8TBK2 473 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 FRS2Q8WU20 508 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 JPH3Q8WXH2 748 aaPredicted RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 FUBP1Q96AE4 644 aaKnown RBP11.56□□□□□ -0.56
SEC16A-207ENST00000453963 IGSF21Q96ID5 467 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 EPYCQ99645 322 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 GPR83Q9NYM4 423 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 EMCNQ9ULC0 261 aa11.56□□□□□ -0.56
SEC16A-207ENST00000453963 DISC1C4P0D8 188 aa11.55□□□□□ -0.56
SEC16A-207ENST00000453963 MITFO75030 526 aaPredicted RBP11.55□□□□□ -0.56
SEC16A-207ENST00000453963 GNSP15586 552 aa11.55□□□□□ -0.56
SEC16A-207ENST00000453963 GPX3P22352 226 aa11.55□□□□□ -0.56
SEC16A-207ENST00000453963 TCEA1P23193 301 aaKnown RBP11.55□□□□□ -0.56
SEC16A-207ENST00000453963 CFL1P23528 166 aaKnown RBP11.55□□□□□ -0.56
SEC16A-207ENST00000453963 CTSOP43234 321 aaPredicted RBP11.55□□□□□ -0.56
SEC16A-207ENST00000453963 SNTB2Q13425 540 aaKnown RBP11.55□□□□□ -0.56
SEC16A-207ENST00000453963 NTRK2Q16620 822 aa11.55□□□□□ -0.56
SEC16A-207ENST00000453963 GTF2IRD2BQ6EKJ0 949 aa11.55□□□□□ -0.56
SEC16A-207ENST00000453963 GTF2IRD2Q86UP8 949 aa11.55□□□□□ -0.56
SEC16A-207ENST00000453963 KIF18BQ86Y91 864 aa11.55□□□□□ -0.56
SEC16A-207ENST00000453963 ZNF280BQ86YH2 543 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms