RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 OR5T3Q8NGG3 340 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 PSMA8Q8TAA3 256 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 IFI44Q8TCB0 444 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 ZFP90Q8TF47 636 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 OR5P2Q8WZ92 322 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 NAT6Q93015 286 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 EXOSC8Q96B26 276 aaKnown RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 CCDC124Q96CT7 223 aaKnown RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 ASB9Q96DX5 294 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 CNRIP1Q96F85 164 aaPredicted RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 ZNF681Q96N22 645 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 GBP5Q96PP8 586 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 PANX1Q96RD7 426 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 CSF3RQ99062 836 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 FAIM2Q9BWQ8 316 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 NPLQ9BXD5 320 aaPredicted RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 NLNQ9BYT8 704 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 ALG2Q9H553 416 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 ZNF768Q9H5H4 540 aaKnown RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 EPS8L2Q9H6S3 715 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 CXorf36Q9H7Y0 433 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 KAT8Q9H7Z6 458 aaKnown RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 COPS7BQ9H9Q2 264 aaPredicted RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 LYRM4Q9HD34 91 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 MIEF1Q9NQG6 463 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 SLC35C2Q9NQQ7 365 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 PRDM9Q9NQV7 894 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 SIRT3Q9NTG7 399 aaPredicted RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 ACSS1Q9NUB1 689 aaPredicted RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 GPATCH2Q9NW75 528 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 SOHLH2Q9NX45 425 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.67□□□□□ -1.5
SDC4P-201ENST00000453285 RAB23Q9ULC3 237 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 NAALAD2Q9Y3Q0 740 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 HCN4Q9Y3Q4 1203 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 L3MBTL1Q9Y468 752 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 PCNX3Q9H6A9 2034 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 DMDP11532 3685 aa5.67□□□□□ -1.5
SDC4P-201ENST00000453285 EXPH5Q8NEV8 1989 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 A0A0A6YYC8 382 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 IGHV5-10-1A0A0J9YXX1 117 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 TCRBV3S1A0A5B6 114 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ZNF860A6NHJ4 632 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 GLOD5A6NK44 160 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 FAM227AF5H4B4 570 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 I3L1I5 382 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 SGK494L7N484 410 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 PDPK1O15530 556 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CHST10O43529 356 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 KRT36O76013 467 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 KCNK5O95279 499 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 PSMG1O95456 288 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 NSA2O95478 260 aaKnown RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ANP32DO95626 131 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CPNE6O95741 557 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 LDOC1O95751 146 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ABCB1P08183 1280 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ANKRD34CP0C6C1 535 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 NR2F6P10588 404 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CKMT2P17540 419 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ATP6V1B2P21281 511 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CPN2P22792 545 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ACP1P24666 158 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 SOX18P35713 384 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 GRK6P43250 576 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 PPM1FP49593 454 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CDK9P50750 372 aaKnown RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 DUSP3P51452 185 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 RAB38P57729 211 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 DAB2P98082 770 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ABHD18Q0P651 414 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 BNIP2Q12982 314 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 SF3A2Q15428 464 aaKnown RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 GPR19Q15760 415 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CLPPQ16740 277 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ZNF750Q32MQ0 723 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 SNAP47Q5SQN1 464 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 C6orf163Q5TEZ5 329 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 LCN8Q6JVE9 175 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 AAGABQ6PD74 315 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 RNF111Q6ZNA4 994 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 SLITRK4Q8IW52 837 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ENDOVQ8N8Q3 282 aaKnown RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 OR4A15Q8NGL6 344 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 OR9A4Q8NGU2 314 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 OR10A6Q8NH74 314 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 OR1L3Q8NH93 324 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 SUN3Q8TAQ9 357 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ZNF501Q96CX3 271 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 DUS3LQ96G46 650 aaKnown RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CNDP2Q96KP4 475 aaKnown RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 AMDHD1Q96NU7 426 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 SH3GL1Q99961 368 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 DPYSL5Q9BPU6 564 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 KCTD14Q9BQ13 255 aaPredicted RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 ECSITQ9BQ95 431 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 LRFN3Q9BTN0 628 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 THUMPD3Q9BV44 507 aaKnown RBP5.66□□□□□ -1.5
SDC4P-201ENST00000453285 CHST8Q9H2A9 424 aa5.66□□□□□ -1.5
SDC4P-201ENST00000453285 GLIPR2Q9H4G4 154 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms