RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ARFIP1P53367 373 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 RPS13P62277 151 aaKnown RBP11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ADORA2A-AS1P86434 159 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 HSF1Q00613 529 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ID2Q02363 134 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ART3Q13508 389 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 GTF2H2Q13888 395 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 OR4C11Q6IEV9 310 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 GTF2H2CQ6P1K8 395 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 MTFR2Q6P444 385 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 RPTNQ6XPR3 784 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 HSDL2Q6YN16 418 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 GOLGA7Q7Z5G4 137 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 FGD2Q7Z6J4 655 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 MYLK4Q86YV6 388 aaPredicted RBP11.59□□□□□ -0.55
CPSF4-208ENST00000452047 SPPL2CQ8IUH8 684 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 SULF2Q8IWU5 870 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 SLC34A3Q8N130 599 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 GHDCQ8N2G8 530 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ZCCHC7Q8N3Z6 543 aaKnown RBP11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ZNF321PQ8N8H1 164 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 L3MBTL4Q8NA19 623 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ZFP62Q8NB50 900 aaPredicted RBP11.59□□□□□ -0.55
CPSF4-208ENST00000452047 POGLUT1Q8NBL1 392 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 C16orf52Q8NHV5 167 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 SLC2A12Q8TD20 617 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 RGMAQ96B86 450 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 PAFAH2Q99487 392 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 OR8D2Q9GZM6 311 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 TSPYL1Q9H0U9 437 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 VPS11Q9H270 941 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 IPPKQ9H8X2 491 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 LIN28AQ9H9Z2 209 aaKnown RBP11.59□□□□□ -0.55
CPSF4-208ENST00000452047 CPSF2Q9P2I0 782 aaKnown RBP11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ENTPD4Q9Y227 616 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 ANGPTL3Q9Y5C1 460 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 TNPO3Q9Y5L0 923 aaKnown RBP11.59□□□□□ -0.55
CPSF4-208ENST00000452047 SPACA6W5XKT8 324 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 EML6Q6ZMW3 1958 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 C17orf105B2RV13 164 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 KLRC4-KLRK1H3BQV0 150 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 OR7A17O14581 309 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 PEX1O43933 1283 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 OR6B1O95007 311 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 ETHE1O95571 254 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 CPN2P22792 545 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 PTGER1P34995 402 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 RFC3P40938 356 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 SOX3P41225 446 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 PIK3CGP48736 1102 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 RAP1GDS1P52306 607 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 HK2P52789 917 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 CASP6P55212 293 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 HNRNPH2P55795 449 aaKnown RBP11.58□□□□□ -0.56
CPSF4-208ENST00000452047 TNFRSF17Q02223 184 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 SLAMF1Q13291 335 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 CPSF6Q16630 551 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPSF4-208ENST00000452047 C18orf63Q68DL7 685 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 MRM1Q6IN84 353 aaKnown RBP11.58□□□□□ -0.56
CPSF4-208ENST00000452047 MRGPRGQ86SM5 289 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 GPALPP1Q8IXQ4 340 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF808Q8N4W9 903 aaPredicted RBP11.58□□□□□ -0.56
CPSF4-208ENST00000452047 MNS1Q8NEH6 495 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 OR52B6Q8NGF0 335 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 OR8K3Q8NH51 312 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 WDR20Q8TBZ3 569 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF721Q8TF20 911 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 DCAKDQ8WVC6 231 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 IFT81Q8WYA0 676 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF592Q92610 1267 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 REPS1Q96D71 796 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 RPF2Q9H7B2 306 aaKnown RBP11.58□□□□□ -0.56
CPSF4-208ENST00000452047 DEPPQ9NTK1 212 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 MS4A12Q9NXJ0 267 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 XPR1Q9UBH6 696 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF180Q9UJW8 692 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 RNF11Q9Y3C5 154 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 ATG4BQ9Y4P1 393 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 KLF2Q9Y5W3 355 aaPredicted RBP11.58□□□□□ -0.56
CPSF4-208ENST00000452047 CACNA1CQ13936 2221 aa11.58□□□□□ -0.56
CPSF4-208ENST00000452047 A0A0A6YYD5 115 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 A8MVJ9 347 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PRSS44E7EML9 344 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 WWP2O00308 870 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 FOXE1O00358 373 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 TMPRSS11DO60235 418 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF354AO60765 605 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 EEDO75530 441 aaKnown RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PRKRAO75569 313 aaKnown RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 TUBB4AP04350 444 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 CTAGE8P0CG41 777 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PTX3P26022 381 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 GRNP28799 593 aaKnown RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 BSGP35613 385 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 STT3AP46977 705 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 SERPINB9P50453 376 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 GPR85P60893 370 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms