RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 H3F3CQ6NXT2 135 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 RPS19BP1Q86WX3 136 aaKnown RBP20.27■□□□□ 0.84
C9orf3-208ENST00000451893 KIRREL3Q8IZU9 778 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 CA13Q8N1Q1 262 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 ANKS4BQ8N8V4 417 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 TMEM125Q96AQ2 219 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 DEFB126Q9BYW3 111 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 ALG9Q9H6U8 611 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 LRFN1Q9P244 771 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 SAGE2PA6NJ88 616 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SNX3O60493 162 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 ZG16O60844 167 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 DNAJB6O75190 326 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 CD96P40200 585 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SLC6A12P48065 614 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 TDGF1P3P51864 188 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 PLA2G16P53816 162 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 OCRLQ01968 901 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 ALDH6A1Q02252 535 aaKnown RBP20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SRSF11Q05519 484 aaKnown RBP20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SLC13A2Q13183 592 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 RCN2Q14257 317 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 MAPKAPK3Q16644 382 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 FBXO48Q5FWF7 155 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 ZNF324BQ6AW86 544 aaPredicted RBP20.26■□□□□ 0.83
C9orf3-208ENST00000451893 ZNF787Q6DD87 383 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SPINK14Q6IE38 97 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SLCO4C1Q6ZQN7 724 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 KLHDC8AQ8IYD2 350 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 ADAMTS18Q8TE60 1221 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 CREB3L4Q8TEY5 395 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 MAGED4Q96JG8 741 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 ELAC2Q9BQ52 826 aaKnown RBP20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SIKE1Q9BRV8 207 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 PITHD1Q9GZP4 211 aaPredicted RBP20.26■□□□□ 0.83
C9orf3-208ENST00000451893 REXO4Q9GZR2 422 aaKnown RBP20.26■□□□□ 0.83
C9orf3-208ENST00000451893 PNO1Q9NRX1 252 aaKnown RBP20.26■□□□□ 0.83
C9orf3-208ENST00000451893 MMACHCQ9Y4U1 282 aa20.26■□□□□ 0.83
C9orf3-208ENST00000451893 SUPT3HB4E1H0 165 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 NPHS1O60500 1241 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 SUPT3HO75486 399 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 SLC1A6P48664 564 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 HK2P52789 917 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 ABCE1P61221 599 aaKnown RBP20.25■□□□□ 0.83
C9orf3-208ENST00000451893 HYAL2Q12891 473 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 LAPTM5Q13571 262 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 ZRSR2Q15696 482 aaKnown RBP20.25■□□□□ 0.83
C9orf3-208ENST00000451893 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.25■□□□□ 0.83
C9orf3-208ENST00000451893 FAM47EQ6ZV65 393 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 SPATA21Q7Z572 469 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 LGI4Q8N135 537 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 KIF2BQ8N4N8 673 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 CCDC197Q8NCU1 140 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 PTCD3Q96EY7 689 aaKnown RBP20.25■□□□□ 0.83
C9orf3-208ENST00000451893 SEC16BQ96JE7 1060 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 SIGLEC12Q96PQ1 595 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 ATOH8Q96SQ7 321 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 TRMOQ9BU70 441 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 NPLQ9BXD5 320 aaPredicted RBP20.25■□□□□ 0.83
C9orf3-208ENST00000451893 SLCO1B3Q9NPD5 702 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 PRTFDC1Q9NRG1 225 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 KLHL14Q9P2G3 628 aa20.25■□□□□ 0.83
C9orf3-208ENST00000451893 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.25■□□□□ 0.83
C9orf3-208ENST00000451893 MYO7BQ6PIF6 2116 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 CROCCQ5TZA2 2017 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 CCL21O00585 134 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 CLEC3AO75596 197 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 MYO1DO94832 1006 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 ESRRAP11474 423 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-208ENST00000451893 IMPDH1P20839 514 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 CYB561P49447 251 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 CLCN2P51788 898 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 RAB38P57729 211 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 IRF8Q02556 426 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 GALNT1Q10472 559 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-208ENST00000451893 CDKL4Q5MAI5 379 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 MTFR2Q6P444 385 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 GALNTL5Q7Z4T8 443 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 FAM47BQ8NA70 645 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 ESAMQ96AP7 390 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 TMEM79Q9BSE2 394 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 EFCAB11Q9BUY7 163 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 GATA5Q9BWX5 397 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-208ENST00000451893 NECTIN3Q9NQS3 549 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 FBXW2Q9UKT8 454 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 PCDHGB6Q9Y5F9 930 aa20.24■□□□□ 0.83
C9orf3-208ENST00000451893 UTP20O75691 2785 aaKnown RBP20.24■□□□□ 0.83
C9orf3-208ENST00000451893 TCRBV16S1A1N1A0A5B0 115 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 IFNA16P05015 189 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 MST1P26927 711 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 DCTP40126 519 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 CFAP157Q5JU67 520 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 SLC25A25Q6KCM7 469 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 MDS2Q8NDY4 140 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 OR2L5Q8NG80 312 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 ELP5Q8TE02 316 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 MS4A6EQ96DS6 147 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 L3HYPDHQ96EM0 354 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 HES7Q9BYE0 225 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 EHD1Q9H4M9 534 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms