RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 WWP2O00308 870 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 CYR61O00622 381 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 NME2P1O60361 137 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 PRKRAO75569 313 aaKnown RBP8.08□□□□□ -1.12
RFX3-209ENST00000451859 ITGA10O75578 1167 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 SIX3O95343 332 aaPredicted RBP8.08□□□□□ -1.12
RFX3-209ENST00000451859 ALDOAP04075 364 aaKnown RBP8.08□□□□□ -1.12
RFX3-209ENST00000451859 INHBAP08476 426 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 MTHFD2P13995 350 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ZNF24P17028 368 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 NME2P22392 152 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 CPN2P22792 545 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ATP5A1P25705 553 aaKnown RBP8.08□□□□□ -1.12
RFX3-209ENST00000451859 MEOX1P50221 254 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 HLCSP50747 726 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 HSD17B7P56937 341 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 GPR85P60893 370 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 RPS13P62277 151 aaKnown RBP8.08□□□□□ -1.12
RFX3-209ENST00000451859 RCN2Q14257 317 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 SETDB1Q15047 1291 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 TBCCQ15814 346 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 C3AR1Q16581 482 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 AP5B1Q2VPB7 878 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ADPRMQ3LIE5 342 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 GRHL2Q6ISB3 625 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 CHSY3Q70JA7 882 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 UBE3DQ7Z6J8 389 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ZNF227Q86WZ6 799 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 OR4N5Q8IXE1 308 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ZNF595Q8IYB9 648 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 LAS2Q8IYD9 372 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 LGI4Q8N135 537 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 CYP4Z2PQ8N1L4 340 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 TMEM156Q8N614 296 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ACOT4Q8N9L9 421 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 HUS1BQ8NHY5 278 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 DOK4Q8TEW6 326 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 UBTD2Q8WUN7 234 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 UBE2E3Q969T4 207 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 WDR34Q96EX3 536 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 SEC16BQ96JE7 1060 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 GPR137Q96N19 417 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 FMO2Q99518 471 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ALOXE3Q9BYJ1 711 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ACSS3Q9H6R3 686 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ADAP2Q9NPF8 381 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 DMRT3Q9NQL9 472 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ZNF358Q9NW07 568 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 SUCOQ9UBS9 1254 aaKnown RBP8.08□□□□□ -1.12
RFX3-209ENST00000451859 TINAGQ9UJW2 476 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 ERVK-11Q9UQG0 969 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 CLDN16Q9Y5I7 305 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 IKBKGQ9Y6K9 419 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 CLCA3PQ9Y6N3 262 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 SPACA6W5XKT8 324 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 HCFC1P51610 2035 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 INTS1Q8N201 2190 aaKnown RBP8.08□□□□□ -1.12
RFX3-209ENST00000451859 LRBAP50851 2863 aa8.08□□□□□ -1.12
RFX3-209ENST00000451859 C17orf105B2RV13 164 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 G3V3Y1 287 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 TFECO14948 347 aaPredicted RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 CDC40O60508 579 aaKnown RBP eCLIP8.07□□□□□ -1.12
RFX3-209ENST00000451859 SLC19A2O60779 497 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 CTNSO60931 367 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 OR2J2O76002 312 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 ZFAND5O76080 213 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 KLHL2O95198 593 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 MLYCDO95822 493 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 CTAGE8P0CG41 777 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 ESRRAP11474 423 aaPredicted RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 ABOP16442 354 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 HIST1H1TP22492 207 aaPredicted RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 PTGER1P34995 402 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 CA7P43166 264 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 SSR4P51571 173 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 ALDH18A1P54886 795 aaKnown RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 CASP6P55212 293 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 SLAMF1Q13291 335 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 GTF2H2Q13888 395 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 NAA30Q147X3 362 aaPredicted RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 ELAVL1Q15717 326 aaKnown RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 CPSF6Q16630 551 aaKnown RBP eCLIP8.07□□□□□ -1.12
RFX3-209ENST00000451859 TMEM35AQ53FP2 167 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 TECRLQ5HYJ1 363 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 KHDRBS2Q5VWX1 349 aaKnown RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 GTF2H2CQ6P1K8 395 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 C3P1Q6ZMU1 363 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 NCCRP1Q6ZVX7 275 aaPredicted RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 GOLGA7Q7Z5G4 137 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 CTAGE4Q8IX94 777 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 PLD6Q8N2A8 252 aaKnown RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 TMEM132CQ8N3T6 1108 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 MMGT1Q8N4V1 131 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 ZNF321PQ8N8H1 164 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 PTGR2Q8N8N7 351 aaPredicted RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 SRFBP1Q8NEF9 429 aaKnown RBP8.07□□□□□ -1.12
RFX3-209ENST00000451859 MNS1Q8NEH6 495 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 OR14A16Q8NHC5 309 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 RHEBL1Q8TAI7 183 aa8.07□□□□□ -1.12
RFX3-209ENST00000451859 ASB15Q8WXK1 588 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms