RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SFTPDP35247 375 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 KCNC1P48547 511 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 NUDT2P50583 147 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PSMD7P51665 324 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ATP5J2P56134 94 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DEPDC1Q5TB30 811 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 RTL4Q6ZR62 310 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZC3H3Q8IXZ2 948 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CPEB3Q8NE35 698 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMEM234Q8WY98 164 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 KCNC2Q96PR1 638 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 MNTQ99583 582 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FUT8Q9BYC5 575 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRRG3Q9BZD7 231 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CDC42EP4Q9H3Q1 356 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF624Q9P2J8 865 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 SARDHQ9UL12 918 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRAMEF33A0A0G2JMD5 474 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 C17orf113A0A1B0GUU1 675 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 SH3D21A4FU49 640 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 UBDO15205 165 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRAMEF10O60809 474 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 RAB36O95755 333 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 LBPP18428 481 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL10P22301 178 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 GNALP38405 381 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPR85P60893 370 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 OLR1P78380 273 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 MYBPC1Q00872 1141 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC25A11Q02978 314 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 HSPB3Q12988 150 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPR19Q15760 415 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PIP5KL1Q5T9C9 394 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 Q71RC1 249 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 RPS19BP1Q86WX3 136 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FUBP1Q96AE4 644 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FBXL20Q96IG2 436 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FOLH1BQ9HBA9 442 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PAPOLBQ9NRJ5 636 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 TUBGCP6Q96RT7 1819 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FTCDNL1E5RQL4 147 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CAPZBP47756 277 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NME5P56597 212 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CLDN6P56747 220 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PCBP2Q15366 365 aaKnown RBP eCLIP5.36□□□□□ -1.552e-6■■■■■ 64
CDC42BPA-209ENST00000448940 AFMIDQ63HM1 303 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PAPD4Q6PIY7 484 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPAG16Q8N0X2 631 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 RAB8BQ92930 207 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF597Q96LX8 424 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMEM79Q9BSE2 394 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CHST8Q9H2A9 424 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NOL11Q9H8H0 719 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL1RL2Q9HB29 575 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 KLHL20Q9Y2M5 609 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 hCG_1809904A0A1W2PP81 198 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 A0A1W2PPE2 198 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 A0A1W2PR64 198 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 A0A1W2PRV1 198 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TRIM64BA6NI03 449 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 G3V3Y1 287 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PDPK1O15530 556 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 WNT11O96014 354 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRB1P04280 392 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 GP1BAP07359 652 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 IFNGR2P38484 337 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PKNOX1P55347 436 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CYLC2Q14093 348 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ARHGAP19Q14CB8 494 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CRTC2Q53ET0 693 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PERM1Q5SV97 790 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 GARNL3Q5VVW2 1013 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ABHD17CQ6PCB6 329 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPESP1Q6UW49 350 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 MARCH9Q86YJ5 346 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 DPP10Q8N608 796 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NATD1Q8N6N6 113 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZBTB44Q8NCP5 570 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR2AJ1Q8NGZ0 328 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PROKR1Q8TCW9 393 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPOCK2Q92563 424 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PEBP4Q96S96 227 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF607Q96SK3 696 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 INSM2Q96T92 566 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 GINS4Q9BRT9 223 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CD320Q9NPF0 282 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZCCHC3Q9NUD5 404 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TAS2R16Q9NYV7 291 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF407Q9C0G0 2248 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 MAGEB3O15480 346 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 EDIL3O43854 480 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM189A1O60320 539 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 RGS9O75916 674 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 METTL18O95568 372 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 DNASE1L1P49184 302 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ART1P52961 327 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TBL3Q12788 808 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 GTF2H2Q13888 395 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms