RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 WASH3PC4AMC7 463 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 LRRTM2O43300 516 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SOCS5O75159 536 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CYP17A1P05093 508 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MRPL3P09001 348 aaKnown RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RHCEP18577 417 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 PYCR1P32322 319 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SGCBQ16585 318 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GRHL2Q6ISB3 625 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 KCTD18Q6PI47 426 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 UGT2A3Q6UWM9 527 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ARSKQ6UWY0 536 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 WASH2PQ6VEQ5 465 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF584Q8IVC4 421 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SLC15A4Q8N697 577 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ABHD11Q8NFV4 315 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 OR6N1Q8NGY5 312 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 OR8K3Q8NH51 312 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RHBDF1Q96CC6 855 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 C17orf62Q9BQA9 187 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 DPCDQ9BVM2 203 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CACNG6Q9BXT2 260 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 TTTY10Q9BZA0 68 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ACTL8Q9H568 366 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CRTAC1Q9NQ79 661 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ALKBH4Q9NXW9 302 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 KCNN3Q9UGI6 736 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 OARD1Q9Y530 152 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 C10orf71Q711Q0 1435 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 XRN1Q8IZH2 1706 aaKnown RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 FUOMA2VDF0 154 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 A6NHS1 94 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 SLC16A5O15375 505 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 CREBL2O60519 120 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 MMP20O60882 483 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 PDYNP01213 254 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 EDNRBP24530 442 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 IVDP26440 423 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 EIF1AXP47813 144 aaKnown RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 NCS1P62166 190 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 PMS2P3Q13401 168 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 NFE2L1Q14494 772 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 PON2Q15165 354 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 COL28A1Q2UY09 1125 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 UAP1L1Q3KQV9 507 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 DPY19L3Q6ZPD9 716 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 DCDC5Q6ZRR9 648 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 PRSS48Q7RTY5 328 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF550Q7Z398 422 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 VTCN1Q7Z7D3 282 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 UMODL1-AS1Q8N2C9 162 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 HCAR2Q8TDS4 363 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 C7orf34Q96L11 122 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 MRGPRX2Q96LB1 330 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF285Q96NJ3 590 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 POLDIP3Q9BY77 421 aaKnown RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 ANKRD60Q9BZ19 345 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 XYLT2Q9H1B5 865 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 CCDC86Q9H6F5 360 aaKnown RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 TMEM185BQ9H7F4 350 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 LIPT1Q9Y234 373 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 PADI2Q9Y2J8 665 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 KCNIP3Q9Y2W7 256 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 SNED1Q8TER0 1413 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 EDDM13A0A1B0GTR0 161 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 EIF1AYO14602 144 aaKnown RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 OXSR1O95747 527 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 C1GALT1C1LP0DN25 315 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF14P17017 642 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 AGTR1P30556 359 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 MAGEA11P43364 429 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 GCGRP47871 477 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 CLDN8P56748 225 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 NIPAL4Q0D2K0 466 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 CDK10Q15131 360 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 CCDC58Q4VC31 144 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 PNCKQ6P2M8 343 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 Q6ZVL8 140 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 RAB11FIP2Q7L804 512 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 C14orf80Q86SX3 495 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 HS3ST5Q8IZT8 346 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 ACBD7Q8N6N7 88 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 OR56A3Q8NH54 315 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 LRRC15Q8TF66 581 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 OTUB2Q96DC9 234 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 LRR1Q96L50 414 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 RANBP9Q96S59 729 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 DNAJC15Q9Y5T4 150 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 GLOD5A6NK44 160 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 HSPA12AO43301 675 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 B4GALT2O60909 372 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 OR12D1P0DN82 309 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 ADH5P11766 374 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 GGT1P19440 569 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 HTR2BP41595 481 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 TMEM115Q12893 351 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 GAS6Q14393 721 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.47□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF767PQ75MW2 155 aa7.47□□□□□ -1.21
NEDD9-204ENST00000448183 TSPAN33Q86UF1 283 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms