RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 KRT85P78386 507 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DUSP8Q13202 625 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 RNF187Q5TA31 235 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 EEF1A1P5Q5VTE0 462 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DENND5AQ6IQ26 1287 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DPY19L2P1Q6NXN4 242 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DTX2Q86UW9 622 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ZNF525Q8N782 197 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 OR2L8Q8NGY9 312 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ZNF398Q8TD17 642 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ZNF418Q8TF45 676 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 SLC44A1Q8WWI5 657 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DIO2Q92813 273 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 FBXW5Q969U6 566 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 C8orf49Q96NF6 230 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SELENOOQ9BVL4 669 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SLITRK2Q9H156 845 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 VPS16Q9H269 839 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 MMP27Q9H306 513 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ZWILCHQ9H900 591 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 HPF1Q9NWY4 346 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ERVK-11Q9UQG0 969 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 HPSEQ9Y251 543 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 YARS2Q9Y2Z4 477 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 TTLL3Q9Y4R7 772 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 HEATR5BQ9P2D3 2071 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 IGLV3-16A0A075B6K0 115 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 LRRC3CA6NJW4 275 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 C16orf97H3BN30 126 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 P2RX6O15547 441 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 KDM1AO60341 852 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 FTCDO95954 541 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 ATP1B2P14415 290 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 ZNF20P17024 532 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SYT1P21579 422 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 PON1P27169 355 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SERPINB6P35237 376 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 DPYSL2Q16555 572 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 PRSS53Q2L4Q9 553 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 ZNF750Q32MQ0 723 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 XKR6Q5GH73 641 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 NHSL2Q5HYW2 709 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 IL20RBQ6UXL0 311 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 RTL4Q6ZR62 310 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 FAM47EQ6ZV65 393 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 PRSS41Q7RTY9 318 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 POLNQ7Z5Q5 900 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 TAX1BP1Q86VP1 789 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 C2orf73Q8N5S3 287 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 CNTD1Q8N815 330 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 OR2L3Q8NG85 312 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 OR9A4Q8NGU2 314 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SLC30A5Q8TAD4 765 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 ZPLD1Q8TCW7 415 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SYN2Q92777 582 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 INTS12Q96CB8 462 aaKnown RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 WDYHV1Q96HA8 205 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 TSGA13Q96PP4 275 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 OR2A5Q96R48 311 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SOX7Q9BT81 388 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 FICDQ9BVA6 458 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 TRABDQ9H4I3 376 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 UNKLQ9H9P5 680 aaKnown RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 FN3KRPQ9HA64 309 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 HAUS2Q9NVX0 235 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 ELOVL5Q9NYP7 299 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 PPIEQ9UNP9 301 aaKnown RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 B3GALT5Q9Y2C3 310 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 DTX4Q9Y2E6 619 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.94□□□□□ -1.94
PMS1-215ENST00000447232 C15orf38-AP3S2A0A0A6YYH1 394 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 A0A1W2PNV4 684 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 LRRD1A4D1F6 860 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 CDC7O00311 574 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 LIN7AO14910 233 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 PRKNO60260 465 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 PHF2O75151 1096 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 OR2J2O76002 312 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 NDST3O95803 873 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 CCL3P10147 92 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 COL6A2P12110 1019 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 PFKFB1P16118 471 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 CCNCP24863 283 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 PSMB5P28074 263 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SOX3P41225 446 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 ECI1P42126 302 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 AVPR1BP47901 424 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 TRPC1P48995 793 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 CLCN2P51788 898 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 GPR143P51810 404 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 IRX1P78414 480 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 FMO1Q01740 532 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 FAPQ12884 760 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 GAB1Q13480 694 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 DCST1Q5T197 706 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 KPRPQ5T749 579 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 ZNF449Q6P9G9 518 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 GPSM1Q86YR5 675 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SCUBE1Q8IWY4 988 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms