RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PAQR8Q8TEZ7 354 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 NUDT8Q8WV74 236 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 CSF3RQ99062 836 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 TRIM54Q9BYV2 358 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 ZFP64Q9NPA5 681 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 IARS2Q9NSE4 1012 aaKnown RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 JKAMPQ9P055 326 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 IKZF3Q9UKT9 509 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 MRPS33Q9Y291 106 aaKnown RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 DYRK1BQ9Y463 629 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 MAD1L1Q9Y6D9 718 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 A0A0G2JN53 185 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 CLCA1A8K7I4 914 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 ERI3O43414 337 aaKnown RBP13.25□□□□□ -0.29
HMGN1-208ENST00000443046 NRDCO43847 1150 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 GUCA1CO95843 209 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 FGGP02679 453 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 AHSGP02765 367 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 HRGP04196 525 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 ZNF136P52737 540 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 LIM2P55344 173 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 SORDQ00796 357 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 SLC22A10Q63ZE4 541 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 TMPRSS11BQ86T26 416 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 KIF18BQ86Y91 864 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.25□□□□□ -0.29
HMGN1-208ENST00000443046 LINC01560Q8TB33 94 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 SLC2A12Q8TD20 617 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 ZNF721Q8TF20 911 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 SREK1Q8WXA9 508 aaKnown RBP13.25□□□□□ -0.29
HMGN1-208ENST00000443046 PDLIM5Q96HC4 596 aaKnown RBP13.25□□□□□ -0.29
HMGN1-208ENST00000443046 CAPZA3Q96KX2 299 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 ALOXE3Q9BYJ1 711 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 OR8D2Q9GZM6 311 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 SLC6A15Q9H2J7 730 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 EXO5Q9H790 373 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 DAPP1Q9UN19 280 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 SLC22A14Q9Y267 594 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 KCNE2Q9Y6J6 123 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 DOCK7Q96N67 2140 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 CUBNO60494 3623 aa13.25□□□□□ -0.29
HMGN1-208ENST00000443046 C17orf105B2RV13 164 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 B3GALT2O43825 422 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 IFNA16P05015 189 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 SAT1P21673 171 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 VPS41P49754 854 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 ZNF75DP51815 510 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 PGGT1BP53609 377 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 WNT3P56703 355 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 CRYZQ08257 329 aaKnown RBP13.24□□□□□ -0.29
HMGN1-208ENST00000443046 TBL3Q12788 808 aaKnown RBP13.24□□□□□ -0.29
HMGN1-208ENST00000443046 EFTUD2Q15029 972 aaKnown RBP eCLIP13.24□□□□□ -0.292e-22■■■■■ 48.1
HMGN1-208ENST00000443046 PCBP2Q15366 365 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMGN1-208ENST00000443046 SLCO4C1Q6ZQN7 724 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 CXXC5Q7LFL8 322 aaKnown RBP13.24□□□□□ -0.29
HMGN1-208ENST00000443046 LACC1Q8IV20 430 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 CNTN4Q8IWV2 1026 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 TTLQ8NG68 377 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 NUBPLQ8TB37 319 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 MAIP1Q8WWC4 291 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 SERINC2Q96SA4 455 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 ZNF395Q9H8N7 513 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-208ENST00000443046 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
HMGN1-208ENST00000443046 A0A088AWK7 358 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 MYOCOSA0A1B0GUC4 107 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 GOLGA8MH3BSY2 632 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 CLEC3AO75596 197 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 ETHE1O95571 254 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 IL2RAP01589 272 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 KRT14P02533 472 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 IGKV3-11P04433 115 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 CCDC175P0C221 793 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 PTMSP20962 102 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 ZNF10P21506 573 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-208ENST00000443046 GSTM2P28161 218 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 ASPHQ12797 758 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 NSUN5P2Q63ZY6 315 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 ABHD17CQ6PCB6 329 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 TMIGD1Q6UXZ0 262 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 GALNT7Q86SF2 657 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 CIARTQ8N365 385 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-208ENST00000443046 SLC15A4Q8N697 577 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 OR2L5Q8NG80 312 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 KIAA1191Q96A73 305 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 TIMP4Q99727 224 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 PRDM14Q9GZV8 571 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 NT5DC2Q9H857 520 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 PRDM7Q9NQW5 492 aa13.23□□□□□ -0.29
HMGN1-208ENST00000443046 BOKQ9UMX3 212 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-208ENST00000443046 CHCHD2Q9Y6H1 151 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-208ENST00000443046 NBEAL1Q6ZS30 2694 aa13.22□□□□□ -0.29
HMGN1-208ENST00000443046 PABPN1LA6NDY0 278 aaKnown RBP13.22□□□□□ -0.29
HMGN1-208ENST00000443046 C1QAP02745 245 aa13.22□□□□□ -0.29
HMGN1-208ENST00000443046 C1GALT1C1LP0DN25 315 aa13.22□□□□□ -0.29
HMGN1-208ENST00000443046 GNAZP19086 355 aa13.22□□□□□ -0.29
HMGN1-208ENST00000443046 CERS1P27544 350 aa13.22□□□□□ -0.29
HMGN1-208ENST00000443046 PLA2G16P53816 162 aa13.22□□□□□ -0.29
HMGN1-208ENST00000443046 MTTPP55157 894 aa13.22□□□□□ -0.29
HMGN1-208ENST00000443046 IGLV3-21P80748 117 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms