RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 RPF2Q9H7B2 306 aaKnown RBP19.63■□□□□ 0.73
CDKN3-204ENST00000442975 LYARQ9NX58 379 aaKnown RBP19.63■□□□□ 0.73
CDKN3-204ENST00000442975 MS4A12Q9NXJ0 267 aa19.63■□□□□ 0.73
CDKN3-204ENST00000442975 FETUBQ9UGM5 382 aa19.63■□□□□ 0.73
CDKN3-204ENST00000442975 ERRFI1Q9UJM3 462 aaPredicted RBP19.63■□□□□ 0.73
CDKN3-204ENST00000442975 SLC5A6Q9Y289 635 aa19.63■□□□□ 0.73
CDKN3-204ENST00000442975 ATG4BQ9Y4P1 393 aa19.63■□□□□ 0.73
CDKN3-204ENST00000442975 DOPEY2Q9Y3R5 2298 aa19.63■□□□□ 0.73
CDKN3-204ENST00000442975 FOXE1O00358 373 aaPredicted RBP19.62■□□□□ 0.73
CDKN3-204ENST00000442975 GBAP04062 536 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 SHBGP04278 402 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 NR2F6P10588 404 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 COX7A2P14406 83 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 TLX1P31314 330 aaPredicted RBP19.62■□□□□ 0.73
CDKN3-204ENST00000442975 SLCO1A2P46721 670 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 TDGF1P3P51864 188 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 MAPKAPK3Q16644 382 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 C18orf63Q68DL7 685 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 ZNF324BQ6AW86 544 aaPredicted RBP19.62■□□□□ 0.73
CDKN3-204ENST00000442975 GFRALQ6UXV0 394 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 GALNTL5Q7Z4T8 443 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 LCA5Q86VQ0 697 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 TMEM151AQ8N4L1 468 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 EIF1ADQ8N9N8 165 aaKnown RBP19.62■□□□□ 0.73
CDKN3-204ENST00000442975 TRPC4APQ8TEL6 797 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 PTPMT1Q8WUK0 201 aaPredicted RBP19.62■□□□□ 0.73
CDKN3-204ENST00000442975 SCMH1Q96GD3 660 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 DGAT2Q96PD7 388 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 ZNF717Q9BY31 904 aaPredicted RBP19.62■□□□□ 0.73
CDKN3-204ENST00000442975 VTI1BQ9UEU0 232 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 PPIEQ9UNP9 301 aaKnown RBP19.62■□□□□ 0.73
CDKN3-204ENST00000442975 CPAMD8Q8IZJ3 1885 aa19.62■□□□□ 0.73
CDKN3-204ENST00000442975 SPTAN1Q13813 2472 aaKnown RBP19.61■□□□□ 0.73
CDKN3-204ENST00000442975 A0A0A6YYD5 115 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 A0A1B0GTL3 188 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 GLOD5A6NK44 160 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 PPP6CO00743 305 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 TMPRSS11DO60235 418 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 PRKNO60260 465 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-204ENST00000442975 ITGA10O75578 1167 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 ZFAND5O76080 213 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 UNC5CO95185 931 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 SP1P08047 785 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 MST1P26927 711 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 BSGP35613 385 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 HLCSP50747 726 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 HERVK_113P63132 956 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 PLIN5Q00G26 463 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 FOLH1Q04609 750 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 GGTA1PQ4G0N0 100 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 FAM219BQ5XKK7 198 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 SLC25A25Q6KCM7 469 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 LETMD1Q6P1Q0 360 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 HSDL2Q6YN16 418 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 C16orf47Q6ZP98 133 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-204ENST00000442975 TMEM156Q8N614 296 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 ZNF321PQ8N8H1 164 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 DNAJB8Q8NHS0 232 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 SLC2A12Q8TD20 617 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 ACMSDQ8TDX5 336 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 TMEM125Q96AQ2 219 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 ANKRD9Q96BM1 317 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-204ENST00000442975 TMEM237Q96Q45 408 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 ERVK-6Q9BXR3 956 aa19.61■□□□□ 0.73
CDKN3-204ENST00000442975 TSPAN10Q9H1Z9 355 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-204ENST00000442975 LIN28AQ9H9Z2 209 aaKnown RBP19.61■□□□□ 0.73
CDKN3-204ENST00000442975 USP9YO00507 2555 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-204ENST00000442975 A1L4Q6 167 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 SUPT7LO94864 414 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 SEMA3DO95025 777 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 FAM58BPP0C7Q3 252 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 TNFRSF8P28908 595 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 TRHRP34981 398 aaPredicted RBP19.6■□□□□ 0.73
CDKN3-204ENST00000442975 ARFIP1P53367 373 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 CYP4Z2PQ8N1L4 340 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 FAM98AQ8NCA5 519 aaKnown RBP19.6■□□□□ 0.73
CDKN3-204ENST00000442975 MORN4Q8NDC4 146 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 PSMG3-AS1Q96PY0 264 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 MRPL1Q9BYD6 325 aaKnown RBP19.6■□□□□ 0.73
CDKN3-204ENST00000442975 DDX31Q9H8H2 851 aaKnown RBP19.6■□□□□ 0.73
CDKN3-204ENST00000442975 WDR41Q9HAD4 459 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 COPS7AQ9UBW8 275 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 SEC14L3Q9UDX4 400 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 SLC12A4Q9UP95 1085 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 PCDHGB6Q9Y5F9 930 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 ESPL1Q14674 2120 aa19.6■□□□□ 0.73
CDKN3-204ENST00000442975 ARHGAP10A1A4S6 786 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 FOXO6A8MYZ6 492 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 DYRK3O43781 588 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 NME2P1O60361 137 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 OR10H2O60403 315 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 DLX3O60479 287 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 AIFM1O95831 613 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 DDAH2O95865 285 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 KRT15P19012 456 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 NME2P22392 152 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 ATP5F1P24539 256 aaPredicted RBP19.59■□□□□ 0.73
CDKN3-204ENST00000442975 STT3AP46977 705 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 SSR4P51571 173 aa19.59■□□□□ 0.73
CDKN3-204ENST00000442975 GPR143P51810 404 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms