RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CSHL1Q14406 222 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 SF3B4Q15427 424 aaKnown RBP eCLIP9.2□□□□□ -0.94
SYN3-204ENST00000441821 SIX1Q15475 284 aaPredicted RBP9.2□□□□□ -0.94
SYN3-204ENST00000441821 SLC22A10Q63ZE4 541 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 ADGRD1Q6QNK2 874 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 YTHDF3Q7Z739 585 aaKnown RBP9.2□□□□□ -0.94
SYN3-204ENST00000441821 DENND6AQ8IWF6 608 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 ZNF595Q8IYB9 648 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 LRRC25Q8N386 305 aaPredicted RBP9.2□□□□□ -0.94
SYN3-204ENST00000441821 LIX1Q8N485 282 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 GPATCH11Q8N954 259 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 TMEM52Q8NDY8 209 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 OR5L2Q8NGL0 311 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 OR56A3Q8NH54 315 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 OR14A16Q8NHC5 309 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 PTPMT1Q8WUK0 201 aaPredicted RBP9.2□□□□□ -0.94
SYN3-204ENST00000441821 EEF1AKMT1Q8WVE0 214 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 C1orf54Q8WWF1 131 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 ISL2Q96A47 359 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 PYCR2Q96C36 320 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 HIST1H2AHQ96KK5 128 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 HIST1H2AJQ99878 128 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 H2AFJQ9BTM1 129 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 AICDAQ9GZX7 198 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 VTI1BQ9UEU0 232 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 BOKQ9UMX3 212 aaPredicted RBP9.2□□□□□ -0.94
SYN3-204ENST00000441821 MPDZO75970 2070 aa9.2□□□□□ -0.94
SYN3-204ENST00000441821 TRIM64A6NGJ6 449 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 TRIM64BA6NI03 449 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 EEF1E1-BLOC1S5C9J1V9 151 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 EEF1E1O43324 174 aaKnown RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 IL18BPO95998 194 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 FGGP02679 453 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 IFNA16P05015 189 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 F7P08709 466 aaPredicted RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 BMP7P18075 431 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 TPSB2P20231 275 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 CTSSP25774 331 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 CXCR5P32302 372 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 RGS4P49798 205 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 HNRNPFP52597 415 aaKnown RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 WNT3P56703 355 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 RAB38P57729 211 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 KCNJ2P63252 427 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 BTN3A2P78410 334 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 REEP5Q00765 189 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 SNX1Q13596 522 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 THOC5Q13769 683 aaKnown RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 DHX34Q14147 1143 aaKnown RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 TPSAB1Q15661 275 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 MPEG1Q2M385 716 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 ZNF791Q3KP31 576 aaPredicted RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 PIGGQ5H8A4 983 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 TOR1AIP1Q5JTV8 583 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 NSUN5P2Q63ZY6 315 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 UGT3A1Q6NUS8 523 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 C8orf74Q6P047 294 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 PM20D2Q8IYS1 436 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 RASGEF1CQ8N431 466 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 ZNF321PQ8N8H1 164 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 PAQR8Q8TEZ7 354 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 SLC5A11Q8WWX8 675 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 SREK1Q8WXA9 508 aaKnown RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 NEIL2Q969S2 332 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 HSPBAP1Q96EW2 488 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 FAR2Q96K12 515 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 TIMP4Q99727 224 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 AIF1LQ9BQI0 150 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 OR8D2Q9GZM6 311 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 RAB17Q9H0T7 212 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 SLC6A15Q9H2J7 730 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 ARL15Q9NXU5 204 aa9.19□□□□□ -0.94
SYN3-204ENST00000441821 TRMT6Q9UJA5 497 aaKnown RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 MRPS33Q9Y291 106 aaKnown RBP9.19□□□□□ -0.94
SYN3-204ENST00000441821 C15orf38-AP3S2A0A0A6YYH1 394 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 SH3D21A4FU49 640 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 MBD3L4A6NDZ8 208 aaPredicted RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 MBD3L3A6NE82 208 aaPredicted RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 MBD3L5A6NJ08 208 aaPredicted RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 LRRC3CA6NJW4 275 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 CD8B2A6NJW9 211 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 RNF212BA8MTL3 300 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 CYR61O00622 381 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 CASKO14936 926 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 CTNSO60931 367 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 ERLIN1O75477 346 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 SLC1A2P43004 574 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 TRPC1P48995 793 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 AGFG1P52594 562 aaKnown RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 AP1S2P56377 157 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 STXBP1P61764 594 aaKnown RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 TIAL1Q01085 375 aaKnown RBP eCLIP9.18□□□□□ -0.94
SYN3-204ENST00000441821 CRYZQ08257 329 aaKnown RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 CBLBQ13191 982 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 DUSP8Q13202 625 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 RBBP5Q15291 538 aaKnown RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 ZNF572Q7Z3I7 529 aaPredicted RBP9.18□□□□□ -0.94
SYN3-204ENST00000441821 CLNKQ7Z7G1 428 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 CREG2Q8IUH2 290 aa9.18□□□□□ -0.94
SYN3-204ENST00000441821 LMNTD2Q8IXW0 634 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms