RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 IER2Q9BTL4 223 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 LRRC61Q9BV99 259 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 YTHDF1Q9BYJ9 559 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 TPSD1Q9BZJ3 242 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 CLK4Q9HAZ1 481 aaKnown RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 PRDM7Q9NQW5 492 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 TUBA8Q9NY65 449 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-206ENST00000441580 P2RX2Q9UBL9 471 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ABCG2Q9UNQ0 655 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 ASB4Q9Y574 426 aa12.49□□□□□ -0.41
CPSF4-206ENST00000441580 A0A0G2JN53 185 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 MYO1GB0I1T2 1018 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 C4orf51C9J302 202 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 ZSCAN9O15535 394 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 SH3BP5O60239 455 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 SNAP29O95721 258 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 C1QCP02747 245 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 C9P02748 559 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 LINGO3P0C6S8 592 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 ITGAMP11215 1152 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 FOSL2P15408 326 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 NME1P15531 152 aaKnown RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 POLR2CP19387 275 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 IGFBP5P24593 272 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 AQP1P29972 269 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 PPP2R1BP30154 601 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 CDK9P50750 372 aaKnown RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 NCBP2P52298 156 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 NR1H2P55055 460 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 SELENOWP63302 87 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 KCNJ10P78508 379 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 VLDLRP98155 873 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 HHEXQ03014 270 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 GNA13Q14344 377 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 ELOCQ15369 112 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 LIN52Q52LA3 116 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 REEP3Q6NUK4 255 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 KLHL35Q6PF15 583 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 TTC33Q6PID6 262 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 FIGLAQ6QHK4 219 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 CEACAM20Q6UY09 585 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 VTCN1Q7Z7D3 282 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 TRIM73Q86UV7 250 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 ARMC8Q8IUR7 673 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 TSPAN14Q8NG11 270 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 BAHD1Q8TBE0 780 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 ZDHHC1Q8WTX9 485 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 RASSF5Q8WWW0 418 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 TAMM41Q96BW9 452 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 FBXL20Q96IG2 436 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 AMDHD1Q96NU7 426 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 MYCBPQ99417 103 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 KLHL31Q9H511 634 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 CXorf56Q9H5V9 222 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 UCK1Q9HA47 277 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 KIF17Q9P2E2 1029 aa12.48□□□□□ -0.41
CPSF4-206ENST00000441580 SAMHD1Q9Y3Z3 626 aaKnown RBP12.48□□□□□ -0.41
CPSF4-206ENST00000441580 SNRNP200O75643 2136 aaKnown RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 OR5K3A6NET4 321 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 hCG_2039718K7EN88 272 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 MAP3K13O43283 966 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 B3GALT2O43825 422 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 HS6ST1O60243 411 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 PABPC4LP0CB38 370 aaKnown RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF888P0CJ79 500 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 JUNDP17535 347 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 CSNK2A2P19784 350 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 CCT3P49368 545 aaKnown RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 CRYBA2P53672 197 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 TPD52P55327 224 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 SH3BGRP55822 239 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 RACK1P63244 317 aaKnown RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 PRR5P85299 388 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 TP53BP2Q13625 1128 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 GAS6Q14393 721 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 C16orf72Q14CZ0 275 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 CEBPEQ15744 281 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 MANEAQ5SRI9 462 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 TBPL2Q6SJ96 375 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 SLC36A4Q6YBV0 504 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 GALNT10Q86SR1 603 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 GKN2Q86XP6 184 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 C8orf59Q8N0T1 100 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF786Q8N393 782 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 SPEM1Q8N4L4 309 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 CAMKK1Q8N5S9 505 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 UTP15Q8TED0 518 aaKnown RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 TM4SF19Q96DZ7 209 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 OR2A5Q96R48 311 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 TCEAL2Q9H3H9 227 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 TOR3AQ9H497 397 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 GLIPR2Q9H4G4 154 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 ZCCHC3Q9NUD5 404 aaKnown RBP12.47□□□□□ -0.41
CPSF4-206ENST00000441580 MS4A12Q9NXJ0 267 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 C5AR2Q9P296 337 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 PILRAQ9UKJ1 303 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 POMT2Q9UKY4 750 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 PSME2Q9UL46 239 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms