RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 A8MT66 165 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRSS44E7EML9 344 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PTGES3LE9PB15 166 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 E9PBE3 544 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 H7C0S8 307 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACOT8O14734 319 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 AIM2O14862 343 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 LIN7AO14910 233 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PFDN6O15212 129 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 DCXO43602 365 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 LDB2O43679 373 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZBTB14O43829 449 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLHL41O60662 606 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 SMIM24O75264 130 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 GPC4O75487 556 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TSPAN9O75954 239 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 KAT7O95251 611 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 GJB5O95377 273 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 WISP3O95389 354 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 NFATC1O95644 943 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 BAG2O95816 211 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 GOT2P00505 430 aaKnown RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PENKP01210 267 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CXCL10P02778 98 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 RHOCP08134 193 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ANPEPP15144 967 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACADSP16219 412 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATF6P18850 670 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TNFRSF1BP20333 461 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ITGAXP20702 1163 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 OGNP20774 298 aaKnown RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 IMPDH1P20839 514 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRPH2P23942 346 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 HNF1BP35680 557 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PPARGP37231 505 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCR10P46092 362 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PPP3CCP48454 512 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 NAA20P61599 178 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 UFM1P61960 85 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDC16Q13042 620 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CYLC2Q14093 348 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 IHHQ14623 411 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 RFTN1Q14699 578 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CYTH1Q15438 398 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAPRE2Q15555 327 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TAF1AQ15573 450 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TCTN1Q2MV58 587 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 RUNDC3AQ59EK9 446 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ALG10Q5BKT4 473 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF789Q5FWF6 425 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TECRLQ5HYJ1 363 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ALG10BQ5I7T1 473 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 SH2D4BQ5SQS7 431 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIK3CD-AS1Q5SR53 167 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TPGS2Q68CL5 300 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC8B1Q6J4K2 584 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC39A5Q6ZMH5 540 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CHST9Q7L1S5 443 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIWIL4Q7Z3Z4 852 aaKnown RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 LDB1Q86U70 411 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CUZD1Q86UP6 607 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 IGFN1Q86VF2 1251 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM173Q86WV6 379 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 DEFB107AQ8IZN7 70 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 FAM185AQ8N0U4 392 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CLYBLQ8N0X4 340 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PELI3Q8N2H9 469 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 FBXW8Q8N3Y1 598 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TTC30BQ8N4P2 665 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 IQCF1Q8N6M8 205 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 KDM1BQ8NB78 822 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TNIP2Q8NFZ5 429 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR4L1Q8NH43 312 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF461Q8TAF7 563 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 AGR3Q8TD06 166 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 DTX3LQ8TDB6 740 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 BLOC1S5Q8TDH9 187 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ANKRD49Q8WVL7 239 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 RMDN1Q96DB5 314 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 MOCOSQ96EN8 888 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDKN2AIPNLQ96HQ2 116 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF333Q96JL9 665 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PPP1R36Q96LQ0 422 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF570Q96NI8 536 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSKH2Q96QS6 385 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PANX3Q96QZ0 392 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR52B2Q96RD2 323 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRIB3Q96RU7 358 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 MYCBPQ99417 103 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CD180Q99467 661 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 SERPINI1Q99574 410 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 NDNQ99608 321 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 NUF2Q9BZD4 464 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 SHCBP1LQ9BZQ2 653 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 POMKQ9H5K3 350 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TFB2MQ9H5Q4 396 aaKnown RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF385DQ9H6B1 395 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 EPHX3Q9H6B9 360 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 WDR55Q9H6Y2 383 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CWH43Q9H720 699 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms