RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 NDUFAF7Q7L592 441 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 CPEB2Q7Z5Q1 589 aaKnown RBP16.61■□□□□ 0.25
CCDC188-201ENST00000439765 ANKRD37Q7Z713 158 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 LRRC34Q8IZ02 419 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 CDYL2Q8N8U2 506 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 ACOT4Q8N9L9 421 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 MAGEB10Q96LZ2 347 aaPredicted RBP16.61■□□□□ 0.25
CCDC188-201ENST00000439765 TBCDQ9BTW9 1192 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 CLK4Q9HAZ1 481 aaKnown RBP16.61■□□□□ 0.25
CCDC188-201ENST00000439765 FARSBQ9NSD9 589 aaKnown RBP16.61■□□□□ 0.25
CCDC188-201ENST00000439765 RIC8BQ9NVN3 520 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 PNPOQ9NVS9 261 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 TRPS1Q9UHF7 1281 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 DAPP1Q9UN19 280 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 TRAF6Q9Y4K3 522 aa16.61■□□□□ 0.25
CCDC188-201ENST00000439765 PCDH17O14917 1159 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 AZIN1O14977 448 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 PRMT3O60678 531 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 MLLT10P55197 1068 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 TCHHL1Q5QJ38 904 aaPredicted RBP16.6■□□□□ 0.25
CCDC188-201ENST00000439765 SH2D4BQ5SQS7 431 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 VWA5B1Q5TIE3 1220 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 IRAK1BP1Q5VVH5 260 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 QSOX2Q6ZRP7 698 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 HPS6Q86YV9 775 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 CLYBLQ8N0X4 340 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 TMEM52Q8NDY8 209 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 RGMAQ96B86 450 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 THOC3Q96J01 351 aaKnown RBP16.6■□□□□ 0.25
CCDC188-201ENST00000439765 PTCHD1Q96NR3 888 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 ROGDIQ9GZN7 287 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 ZNF700Q9H0M5 742 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 ZNF451Q9Y4E5 1061 aa16.6■□□□□ 0.25
CCDC188-201ENST00000439765 SVILO95425 2214 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 GMNCA6NCL1 334 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 FOXE1O00358 373 aaPredicted RBP16.59■□□□□ 0.25
CCDC188-201ENST00000439765 SHOX2O60902 331 aaPredicted RBP16.59■□□□□ 0.25
CCDC188-201ENST00000439765 ENO1P06733 434 aaKnown RBP16.59■□□□□ 0.25
CCDC188-201ENST00000439765 UROSP10746 265 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 PTX3P26022 381 aaPredicted RBP16.59■□□□□ 0.25
CCDC188-201ENST00000439765 FOXA1P55317 472 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 SFT2D3Q587I9 215 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 OR4C11Q6IEV9 310 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 ATCAYQ86WG3 371 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 KIRREL3Q8IZU9 778 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 EFCAB3Q8N7B9 438 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 PIWIL2Q8TC59 973 aaKnown RBP16.59■□□□□ 0.25
CCDC188-201ENST00000439765 METTL6Q8TCB7 284 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 AGR3Q8TD06 166 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 ADAMTS18Q8TE60 1221 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 SELENOMQ8WWX9 145 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 CHMP6Q96FZ7 201 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 KCNA7Q96RP8 456 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 MAPKAP1Q9BPZ7 522 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 PRDM9Q9NQV7 894 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 FBXW2Q9UKT8 454 aa16.59■□□□□ 0.25
CCDC188-201ENST00000439765 EEDO75530 441 aaKnown RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 CRCPO75575 148 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 SORBS2O94875 1100 aaKnown RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 SCELO95171 688 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 PDYNP01213 254 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 ALPPP05187 535 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 PRR35P0CG20 571 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 SEC24CP53992 1094 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 OR4D2P58180 307 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 CUL3Q13618 768 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 UBAP2LQ14157 1087 aaKnown RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 CLEC6AQ6EIG7 209 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 PAPD4Q6PIY7 484 aaKnown RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 CLNKQ7Z7G1 428 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 PLPP5Q8NEB5 264 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 SERPINI1Q99574 410 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 SMAD5Q99717 465 aaKnown RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 WDR77Q9BQA1 342 aaPredicted RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 TUBB6Q9BUF5 446 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 ZNF717Q9BY31 904 aaPredicted RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 LHPPQ9H008 270 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 ZNF552Q9H707 407 aaPredicted RBP16.58■□□□□ 0.24
CCDC188-201ENST00000439765 LYRM4Q9HD34 91 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 NECTIN3Q9NQS3 549 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 PRTFDC1Q9NRG1 225 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 FGFR1OP2Q9NVK5 253 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 SNX6Q9UNH7 406 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 TIMM22Q9Y584 194 aa16.58■□□□□ 0.24
CCDC188-201ENST00000439765 IGKV3D-11A0A0A0MRZ8 115 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 TMEM233B4DJY2 109 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 CYR61O00622 381 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 GBAP04062 536 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 KITP10721 976 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SERPINB3P29508 390 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 HMOX2P30519 316 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SOX8P57073 446 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SLC13A2Q13183 592 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SLAMF1Q13291 335 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 BTBD16Q32M84 506 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 UGT3A2Q3SY77 523 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 NADK2Q4G0N4 442 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 C10orf62Q5T681 223 aaPredicted RBP16.57■□□□□ 0.24
CCDC188-201ENST00000439765 KANK2Q63ZY3 851 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 ZGRF1Q86YA3 2104 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms