RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 PSIP1O75475 530 aaKnown RBP10.28□□□□□ -0.76
CSTF3-203ENST00000438862 OR2J2O76002 312 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 TTC4O95801 387 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 IL18BPO95998 194 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 CATP04040 527 aaKnown RBP10.28□□□□□ -0.76
CSTF3-203ENST00000438862 TP53P04637 393 aaPredicted RBP10.28□□□□□ -0.76
CSTF3-203ENST00000438862 GSTA2P09210 222 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 SLC35G6P0C7Q6 338 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 ENDOUP21128 410 aaKnown RBP10.28□□□□□ -0.76
CSTF3-203ENST00000438862 CTSSP25774 331 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 ECHS1P30084 290 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 GRIA1P42261 906 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 BTG2P78543 158 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 ACVR1Q04771 509 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 FOXO1Q12778 655 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 POU4F2Q12837 409 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 SEMA3AQ14563 771 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 TRADDQ15628 312 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.28□□□□□ -0.76
CSTF3-203ENST00000438862 THEMIS2Q5TEJ8 643 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 EMBQ6PCB8 327 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 CYS1Q717R9 158 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 ASPGQ86U10 573 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 SLC26A11Q86WA9 606 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 GOLM1Q8NBJ4 401 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 PPP1R14CQ8TAE6 165 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 ZNF480Q8WV37 535 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 SLC13A3Q8WWT9 602 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 KIAA1191Q96A73 305 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 SGCZQ96LD1 299 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 CCDC138Q96M89 665 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 PKP4Q99569 1192 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 AARSD1Q9BTE6 412 aaKnown RBP10.28□□□□□ -0.76
CSTF3-203ENST00000438862 KIFC1Q9BW19 673 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 P2RY12Q9H244 342 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 CLK4Q9HAZ1 481 aaKnown RBP10.28□□□□□ -0.76
CSTF3-203ENST00000438862 ACKR4Q9NPB9 350 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 SACM1LQ9NTJ5 587 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 NPFFR2Q9Y5X5 522 aa10.28□□□□□ -0.76
CSTF3-203ENST00000438862 IGKV3D-11A0A0A0MRZ8 115 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 EEF1E1-BLOC1S5C9J1V9 151 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 G3V3Y1 287 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 EEF1E1O43324 174 aaKnown RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 GALR3O60755 368 aaPredicted RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 MYO1DO94832 1006 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 OR6B1O95007 311 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 SLC16A8O95907 504 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 P04436 131 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 PAX1P15863 534 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 MAOAP21397 527 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 RPS3P23396 243 aaKnown RBP eCLIP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 PTH2RP49190 550 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 PRAMEP78395 509 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 FRG1Q14331 258 aaKnown RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 GBX1Q14549 363 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 ZNF750Q32MQ0 723 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 CHRFAM7AQ494W8 412 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 ACSF3Q4G176 576 aaPredicted RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 XKR6Q5GH73 641 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 TSTD2Q5T7W7 516 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 CAPN13Q6MZZ7 669 aaPredicted RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 CNPY4Q8N129 248 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 AFAP1L2Q8N4X5 818 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 PPFIBP2Q8ND30 876 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 PPHLN1Q8NEY8 458 aaKnown RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 NEIL3Q8TAT5 605 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 NTNG2Q96CW9 530 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 CATSPERZQ9NTU4 200 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 ABCF3Q9NUQ8 709 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 PIH1D1Q9NWS0 290 aaKnown RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 QPCTLQ9NXS2 382 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 TUBA8Q9NY65 449 aaPredicted RBP10.27□□□□□ -0.77
CSTF3-203ENST00000438862 MYOTQ9UBF9 498 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 NFU1Q9UMS0 254 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 SOX13Q9UN79 622 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 TEX264Q9Y6I9 313 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 ANK2Q01484 3957 aa10.27□□□□□ -0.77
CSTF3-203ENST00000438862 CCDC151A5D8V7 595 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 GOLGA8MH3BSY2 632 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 ALOX12P18054 663 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 PGAM1P18669 254 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 CHRM3P20309 590 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 GRK3P35626 688 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 SOX3P41225 446 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 DNASE1L1P49184 302 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 GPR143P51810 404 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 SESN2P58004 480 aaPredicted RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 VSNL1P62760 191 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 RUNX1T1Q06455 604 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 HYAL2Q12891 473 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 PDIA2Q13087 525 aaKnown RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 HECTD2Q5U5R9 776 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 NSUN5P2Q63ZY6 315 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 TRMT10CQ7L0Y3 403 aaKnown RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 ABHD13Q7L211 337 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 LDB1Q86U70 411 aaPredicted RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 LRRC56Q8IYG6 542 aaPredicted RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 PM20D2Q8IYS1 436 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms