RNA–Protein interactions for RNA: ENST00000436100.1

TPM4P1-201, Transcript of tropomyosin 4 pseudogene 1, humanhuman

BASIC

Gene TPM4P1, Length 807 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P1-201ENST00000436100 SIX1Q15475 284 aaPredicted RBP16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 NXPE4Q6UWF7 544 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 CAND1Q86VP6 1230 aaKnown RBP16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 LACC1Q8IV20 430 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 SPNS2Q8IVW8 549 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 NEIL3Q8TAT5 605 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 PIGTQ969N2 578 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 KIAA1191Q96A73 305 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 TSNARE1Q96NA8 513 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 PIP5K1AQ99755 562 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 OR8D2Q9GZM6 311 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 SPNS1Q9H2V7 528 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 RYDENQ9NUL5 291 aaKnown RBP16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 SPRR3Q9UBC9 169 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 COPS7AQ9UBW8 275 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 VTI1BQ9UEU0 232 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 CAPN6Q9Y6Q1 641 aa16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 SONP18583 2426 aaKnown RBP16.42■□□□□ 0.22
TPM4P1-201ENST00000436100 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 CCL3P10147 92 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 TERF1P54274 439 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 KCNJ2P63252 427 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 SERTAD2Q14140 314 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 MPEG1Q2M385 716 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 CLNKQ7Z7G1 428 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 DND1Q8IYX4 353 aaKnown RBP16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 PTPMT1Q8WUK0 201 aaPredicted RBP16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 HSPBAP1Q96EW2 488 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 NDNQ99608 321 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 BAG1Q99933 345 aaPredicted RBP16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 ALOXE3Q9BYJ1 711 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 ZFP64Q9NPA5 681 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 CLDN16Q9Y5I7 305 aa16.41■□□□□ 0.22
TPM4P1-201ENST00000436100 TGFBR3LH3BV60 316 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 HAX1O00165 279 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 ERI3O43414 337 aaKnown RBP16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 GUCA1CO95843 209 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 ENDOUP21128 410 aaKnown RBP16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 KCNJ1P48048 391 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 GPS1Q13098 491 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 PDAP1Q13442 181 aaKnown RBP16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 HSP90AA5PQ58FG0 334 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 SEM1Q6ZVN7 128 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 TMPRSS11BQ86T26 416 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 THOC6Q86W42 341 aaKnown RBP16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 KLHDC8AQ8IYD2 350 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 PM20D2Q8IYS1 436 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 FAM47BQ8NA70 645 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 NAXEQ8NCW5 288 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 MCUQ8NE86 351 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 TNIP2Q8NFZ5 429 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 SLC22A8Q8TCC7 542 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 PERPQ96FX8 193 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 ZNF703Q9H7S9 590 aaPredicted RBP16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 IARS2Q9NSE4 1012 aaKnown RBP16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 CNIH4Q9P003 139 aa16.4■□□□□ 0.22
TPM4P1-201ENST00000436100 LRIT2A6NDA9 550 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 C17orf105B2RV13 164 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 C4orf51C9J302 202 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 WIPF1O43516 503 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 PIGAP37287 484 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 TIAL1Q01085 375 aaKnown RBP eCLIP16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 ACSF3Q4G176 576 aaPredicted RBP16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 TRIM40Q6P9F5 258 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 LRRC25Q8N386 305 aaPredicted RBP16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 SLC15A4Q8N697 577 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 C2CD4AQ8NCU7 369 aaPredicted RBP16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 SLC2A12Q8TD20 617 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 CCT6BQ92526 530 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 MS4A6EQ96DS6 147 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 CAPZA3Q96KX2 299 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 SERINC2Q96SA4 455 aa16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 COPS7BQ9H9Q2 264 aaPredicted RBP16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 SEMA4BQ9NPR2 832 aaPredicted RBP16.39■□□□□ 0.21
TPM4P1-201ENST00000436100 NINQ8N4C6 2090 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 C15orf38-AP3S2A0A0A6YYH1 394 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 CYR61O00622 381 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 DYRK3O43781 588 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 CNOT4O95628 575 aaKnown RBP16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 FREM3P0C091 2139 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 COX7A2P14406 83 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 GNAZP19086 355 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 OPRM1P35372 400 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 HNRNPFP52597 415 aaKnown RBP16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 MTTPP55157 894 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 TGM3Q08188 693 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 TMIGD1Q6UXZ0 262 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 KRT78Q8N1N4 520 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 TMEM52Q8NDY8 209 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 NUBPLQ8TB37 319 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 PAQR8Q8TEZ7 354 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 SREK1Q8WXA9 508 aaKnown RBP16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 RUNDC3BQ96NL0 473 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 PITHD1Q9GZP4 211 aaPredicted RBP16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 AICDAQ9GZX7 198 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 TRMT1Q9NXH9 659 aaKnown RBP16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 DAPP1Q9UN19 280 aa16.38■□□□□ 0.21
TPM4P1-201ENST00000436100 SLC22A14Q9Y267 594 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms