RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 CDK15Q96Q40 435 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 PSD3Q9NYI0 1048 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 CACNA1DQ01668 2161 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 TMEM200CA6NKL6 621 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 SMIM24O75264 130 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 CLDN9O95484 217 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 ABHD2P08910 425 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 TNNI3P19429 210 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 NEK2P51955 445 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 ZRSR2Q15696 482 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 GPR180Q86V85 440 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 ZCCHC7Q8N3Z6 543 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 TMEM156Q8N614 296 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 OR14A16Q8NHC5 309 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 TMEM125Q96AQ2 219 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 MRPL57Q9BQC6 102 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 NTMT1Q9BV86 223 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 ZNF717Q9BY31 904 aaPredicted RBP20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 LIN28AQ9H9Z2 209 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 ZBTB26Q9HCK0 441 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 MS4A12Q9NXJ0 267 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 PCTPQ9UKL6 214 aa20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 YARS2Q9Y2Z4 477 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-205ENST00000434030 C17orf105B2RV13 164 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 FOXE1O00358 373 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 FGF17O60258 216 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 ETHE1O95571 254 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 SBK3P0C264 359 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 RHOXF2BP0C7M4 288 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 BSGP35613 385 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 CCNG1P51959 295 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 HNRNPH2P55795 449 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 IGLV3-21P80748 117 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 CUL3Q13618 768 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 KRTCAP3Q53RY4 240 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 LGSNQ5TDP6 509 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 C18orf63Q68DL7 685 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 ADGRD1Q6QNK2 874 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 C16orf47Q6ZP98 133 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 TRMT10CQ7L0Y3 403 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 OR4N5Q8IXE1 308 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 TMEM151AQ8N4L1 468 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 CPSF7Q8N684 471 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 ZNF321PQ8N8H1 164 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 MTFMTQ96DP5 389 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 TRIM44Q96DX7 344 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 GPR137Q96N19 417 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 NSUN5Q96P11 429 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 RHOXF2Q9BQY4 288 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 OR8D2Q9GZM6 311 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 TSPAN10Q9H1Z9 355 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 MRPL46Q9H2W6 279 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 RPF2Q9H7B2 306 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 PHF11Q9UIL8 331 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 ATG4BQ9Y4P1 393 aa20.59■□□□□ 0.89
SEMA3B-205ENST00000434030 PCNX1Q96RV3 2341 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 NPIPA5E9PKD4 350 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 RIPK2O43353 540 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 ZG16O60844 167 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 EEDO75530 441 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 MLYCDO95822 493 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 FAM153BP0C7A2 387 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 COL8A1P27658 744 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 ARL1P40616 181 aaPredicted RBP20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 RBPJQ06330 500 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 FAM153CQ494X1 144 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 MRM1Q6IN84 353 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 HSDL2Q6YN16 418 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 TIFABQ6ZNK6 161 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 SIAH3Q8IW03 269 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 CYP4Z2PQ8N1L4 340 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 C7orf57Q8NEG2 295 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 SLC2A12Q8TD20 617 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 TANKQ92844 425 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 DDX31Q9H8H2 851 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 MYOTQ9UBF9 498 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 PPT2Q9UMR5 302 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 NPIPA1Q9UND3 350 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 ASB4Q9Y574 426 aa20.58■□□□□ 0.89
SEMA3B-205ENST00000434030 A0A0A6YYD5 115 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 TRGV8A0A0C4DH27 118 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 MAST4O15021 2626 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 PROM1O43490 865 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 PRKRAO75569 313 aaKnown RBP20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 OR2J2O76002 312 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 TLX1P31314 330 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 SSR4P51571 173 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 TNFRSF17Q02223 184 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 TRAF3Q13114 568 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 RNFT1Q5M7Z0 435 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 RPS27LQ71UM5 84 aaKnown RBP20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 MDGA2Q7Z553 956 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 SULF2Q8IWU5 870 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 MTBPQ96DY7 904 aa20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 KLF13Q9Y2Y9 288 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-205ENST00000434030 ASNA1O43681 348 aa20.56■□□□□ 0.88
SEMA3B-205ENST00000434030 TMPRSS11DO60235 418 aa20.56■□□□□ 0.88
SEMA3B-205ENST00000434030 RPS17P08708 135 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-205ENST00000434030 BUD31P41223 144 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms