RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 KNSTRNQ9Y448 316 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 NACAE9PAV3 2078 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 RAI1Q7Z5J4 1906 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 TRBV5-4A0A0C4DH59 114 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 SYCE3A1L190 88 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 LRRD1A4D1F6 860 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 E7ENQ6 273 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 H0YIG0 161 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 TTI1O43156 1089 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 PPIP5K2O43314 1243 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 SRPX2O60687 465 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 PRAF2O60831 178 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 B3GALNT1O75752 331 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 BCAS2O75934 225 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 AKAP3O75969 853 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 KBTBD11O94819 623 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 C9P02748 559 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 YES1P07947 543 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 HOXC4P09017 264 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 ANKRD34CP0C6C1 535 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 STMN1P16949 149 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 ZNF32P17041 273 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 GAP43P17677 238 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 ACAT1P24752 427 aaKnown RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 HPDP32754 393 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 CTNNB1P35222 781 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 CD86P42081 329 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 MAGEB1P43366 347 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 RABIFP47224 123 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 SMSP52788 366 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 SLC12A3P55017 1021 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 HSD17B7P56937 341 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 IL1RL1Q01638 556 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 PTGISQ16647 500 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 IFI44LQ53G44 452 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 LACTB2Q53H82 288 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 C6orf136Q5SQH8 315 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 PRAMEF8Q5VWM4 474 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 ZNF530Q6P9A1 599 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 CNSTQ6PJW8 725 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 IGFL2Q6UWQ7 119 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 MCM10Q7L590 875 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 CROCCP3Q8IVE0 287 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 SERPINA12Q8IW75 414 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 KIAA0895Q8NCT3 520 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 OR6T1Q8NGN1 323 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 RIT1Q92963 219 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 FAM46BQ96A09 425 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 LRRC3BQ96PB8 259 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 ZNF559Q9BR84 538 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 INPP5KQ9BT40 448 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 TRIM7Q9C029 511 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 XPO4Q9C0E2 1151 aaKnown RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 PIH1D3Q9NQM4 214 aaKnown RBP2.47□□□□□ -2.01
PTPN4-205ENST00000433888 CUTCQ9NTM9 273 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 POLKQ9UBT6 870 aa2.47□□□□□ -2.01
PTPN4-205ENST00000433888 KLF18A0A0U1RQI7 1052 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 YDJCA8MPS7 323 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 SLC33A1O00400 549 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 CLDN4O14493 209 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 HTATSF1O43719 755 aaKnown RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 STX6O43752 255 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 FCGR3BO75015 233 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 BAG2O95816 211 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 OLFM2O95897 454 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 STAG3L1P0CL83 205 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 EEF2P13639 858 aaKnown RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 CD1DP15813 335 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 EPORP19235 508 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 ELK1P19419 428 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 HLA-DPA1P20036 260 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 CASTP20810 708 aaKnown RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 CCND3P30281 292 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 FCGR2BP31994 310 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 FCGR2CP31995 323 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 NT5C2P49902 561 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 GMPSP49915 693 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 MTCP1P56278 107 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 ST8SIA6P61647 398 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 NAAAQ02083 359 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 CACNG1Q06432 222 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 NPRL3Q12980 569 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 SPOUT1Q5T280 376 aaKnown RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 CGB2Q6NT52 195 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 TATDN1Q6P1N9 297 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 CASC4Q6P4E1 433 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 LINC00696Q6ZRV3 163 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 ADGRD2Q7Z7M1 963 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 DNASE1L2Q92874 299 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 ATP6V0A1Q93050 837 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 AP2M1Q96CW1 435 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 ATP6V0BQ99437 205 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 SDHCQ99643 169 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 MLPHQ9BV36 600 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 SNX25Q9H3E2 840 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 RIMS4Q9H426 269 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-205ENST00000433888 FN3KQ9H479 309 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 TMEM206Q9H813 350 aa2.46□□□□□ -2.02
PTPN4-205ENST00000433888 LMAN1LQ9HAT1 526 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms