RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 REP15Q6BDI9 236 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 SHISA5Q8N114 240 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 PCYOX1LQ8NBM8 494 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 VPS37AQ8NEZ2 397 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 COL26A1Q96A83 441 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 TAAR9Q96RI9 348 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 C5AR2Q9P296 337 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 UTS2RQ9UKP6 389 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 PSME2Q9UL46 239 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 MAP4K5Q9Y4K4 846 aa24.96■■□□□ 1.59
TMEM248-205ENST00000433271 WASHC1A8K0Z3 465 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 SCN2BO60939 215 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 CPNE3O75131 537 aaKnown RBP24.95■■□□□ 1.58
TMEM248-205ENST00000433271 KCNK5O95279 499 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 ETV5P41161 510 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 ABHD18Q0P651 414 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 SYT16Q17RD7 645 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 OR52E8Q6IFG1 317 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 WDR36Q8NI36 951 aaKnown RBP24.95■■□□□ 1.58
TMEM248-205ENST00000433271 DNAJB14Q8TBM8 379 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.95■■□□□ 1.58
TMEM248-205ENST00000433271 PEX11GQ96HA9 241 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 ZPBPQ9BS86 351 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 ASPSCR1Q9BZE9 553 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 RMND5AQ9H871 391 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 SLC35C2Q9NQQ7 365 aa24.95■■□□□ 1.58
TMEM248-205ENST00000433271 PRSS51A0A1B0GVH4 220 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 BLACEA4D250 179 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 B2RBV5 119 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 FAM227AF5H4B4 570 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 RNASET2O00584 256 aaKnown RBP24.94■■□□□ 1.58
TMEM248-205ENST00000433271 MRASO14807 208 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 FBLP22087 321 aaKnown RBP24.94■■□□□ 1.58
TMEM248-205ENST00000433271 RASSF2P50749 326 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 MAPK10P53779 464 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 MPEG1Q2M385 716 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 PAGE3Q5JUK9 113 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 SLC2A7Q6PXP3 512 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 DPP10Q8N608 796 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 TANKQ92844 425 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 PMEPA1Q969W9 287 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 EXOSC8Q96B26 276 aaKnown RBP24.94■■□□□ 1.58
TMEM248-205ENST00000433271 TBC1D20Q96BZ9 403 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 DDA1Q9BW61 102 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 MAP10Q9P2G4 905 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 PISDQ9UG56 409 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 A0A1W2PNU3 283 aaPredicted RBP24.94■■□□□ 1.58
TMEM248-205ENST00000433271 ONECUT2O95948 504 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 IL10P22301 178 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 RORAP35398 523 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 LRRC74AQ0VAA2 488 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 TARDBPQ13148 414 aaKnown RBP eCLIP24.94■■□□□ 1.585e-7■■■■■ 27.6
TMEM248-205ENST00000433271 ADAMTS14Q8WXS8 1223 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 GTF2H4Q92759 462 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 CIDECQ96AQ7 238 aaPredicted RBP24.94■■□□□ 1.58
TMEM248-205ENST00000433271 ITCHQ96J02 903 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 TRPC4Q9UBN4 977 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 MRPS33Q9Y291 106 aaKnown RBP24.94■■□□□ 1.58
TMEM248-205ENST00000433271 B3GALT1Q9Y5Z6 326 aa24.94■■□□□ 1.58
TMEM248-205ENST00000433271 CROCCQ5TZA2 2017 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 XCR1P46094 333 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 NUDT2P50583 147 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 DCDP81605 110 aaKnown RBP24.93■■□□□ 1.58
TMEM248-205ENST00000433271 ART3Q13508 389 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 NKAIN1Q4KMZ8 207 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 ARHGAP40Q5TG30 622 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 ZNF385CQ66K41 422 aaPredicted RBP24.93■■□□□ 1.58
TMEM248-205ENST00000433271 MED25Q71SY5 747 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 ZNF771Q7L3S4 317 aaPredicted RBP24.93■■□□□ 1.58
TMEM248-205ENST00000433271 FBXO27Q8NI29 283 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 KLHL29Q96CT2 875 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 SLC7A6OSQ96CW6 309 aaPredicted RBP24.93■■□□□ 1.58
TMEM248-205ENST00000433271 LRFN5Q96NI6 719 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 OR1F2PQ96R84 312 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 ULBP3Q9BZM4 244 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 SERHLQ9NQF3 203 aa24.93■■□□□ 1.58
TMEM248-205ENST00000433271 PMS2P1A4D2B8 440 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 PDPK1O15530 556 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 KRT16P08779 473 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 ZNF28P17035 718 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 SDHBP21912 280 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 HNRNPFP52597 415 aaKnown RBP24.92■■□□□ 1.58
TMEM248-205ENST00000433271 PCBP4P57723 403 aaKnown RBP24.92■■□□□ 1.58
TMEM248-205ENST00000433271 RSPO4Q2I0M5 234 aaPredicted RBP24.92■■□□□ 1.58
TMEM248-205ENST00000433271 FAM180BQ6P0A1 224 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 RINLQ6ZS11 566 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 ANKRD46Q86W74 232 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 ZNF595Q8IYB9 648 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 TMEM52Q8NDY8 209 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 ROPN1LQ96C74 230 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 RNF31Q96EP0 1072 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 CCDC115Q96NT0 180 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 YIPF2Q9BWQ6 316 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 C1orf21Q9H246 121 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.92■■□□□ 1.58
TMEM248-205ENST00000433271 BTNL2Q9UIR0 455 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 MAN2B2Q9Y2E5 1009 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 PCDHGA3Q9Y5H0 932 aa24.92■■□□□ 1.58
TMEM248-205ENST00000433271 MEN1O00255 615 aa24.91■■□□□ 1.58
TMEM248-205ENST00000433271 ERAL1O75616 437 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms