RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ALDH9A1P49189 494 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 LIM2P55344 173 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 TNFRSF17Q02223 184 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 CAPRIN1Q14444 709 aaKnown RBP17.23■□□□□ 0.35
HMGN1-206ENST00000431390 PIGGQ5H8A4 983 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 C19orf48Q6RUI8 117 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 ANKRD46Q86W74 232 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 PDSS2Q86YH6 399 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 NAXDQ8IW45 347 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 FBXW8Q8N3Y1 598 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 EFCAB3Q8N7B9 438 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 CLPTM1LQ96KA5 538 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 CLK4Q9HAZ1 481 aaKnown RBP17.23■□□□□ 0.35
HMGN1-206ENST00000431390 FANCEQ9HB96 536 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 IRAK4Q9NWZ3 460 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 KCMF1Q9P0J7 381 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 FREM2Q5SZK8 3169 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 NBEAQ8NFP9 2946 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 TRBV5-3A0A0A0MS03 114 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 D6RAR5 112 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 OR2B3O76000 313 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 AIFM1O95831 613 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 FOLR1P15328 257 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 HOXB9P17482 250 aaPredicted RBP17.23■□□□□ 0.35
HMGN1-206ENST00000431390 PLIN5Q00G26 463 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 TRA2AQ13595 282 aaKnown RBP eCLIP17.23■□□□□ 0.358e-24■■□□□ 11.7
HMGN1-206ENST00000431390 RUNX2Q13950 521 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 TRIP6Q15654 476 aaKnown RBP17.23■□□□□ 0.35
HMGN1-206ENST00000431390 GPR19Q15760 415 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 MPEG1Q2M385 716 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 MUM1Q2TAK8 710 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 SPATS1Q496A3 300 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 SAMD4BQ5PRF9 694 aaKnown RBP17.23■□□□□ 0.35
HMGN1-206ENST00000431390 NANOGP8Q6NSW7 305 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 TLDC1Q6P9B6 456 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 PRSS41Q7RTY9 318 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 SLITRK4Q8IW52 837 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 OR8J3Q8NGG0 315 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 MIEF2Q96C03 454 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 CCDC74BQ96LY2 380 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 ANKRD27Q96NW4 1050 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 PANX1Q96RD7 426 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 SPRTNQ9H040 489 aaPredicted RBP17.23■□□□□ 0.35
HMGN1-206ENST00000431390 NANOGQ9H9S0 305 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 ADA2Q9NZK5 511 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 VAPAQ9P0L0 249 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 SLC7A8Q9UHI5 535 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 SPACA6W5XKT8 324 aa17.23■□□□□ 0.35
HMGN1-206ENST00000431390 NSA2O95478 260 aaKnown RBP17.22■□□□□ 0.35
HMGN1-206ENST00000431390 FTH1P19P0C7X4 201 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 ZCCHC18P0CG32 403 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 NR2F6P10588 404 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 CPN2P22792 545 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 PTPN6P29350 595 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 TLX1P31314 330 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-206ENST00000431390 FRKP42685 505 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-206ENST00000431390 SLC7A2P52569 658 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 ITGA1P56199 1179 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 ACY1Q03154 408 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 SPIDRQ14159 915 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 PRSS53Q2L4Q9 553 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 FAM214AQ32MH5 1076 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 SLC48A1Q6P1K1 146 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 SLC15A3Q8IY34 581 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 GPR135Q8IZ08 494 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 CLECL1Q8IZS7 167 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 FAM13CQ8NE31 585 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 GOT1L1Q8NHS2 421 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-206ENST00000431390 DNAJB14Q8TBM8 379 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 TMEM125Q96AQ2 219 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 ZNF501Q96CX3 271 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-206ENST00000431390 GBP5Q96PP8 586 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 SH3GL1Q99961 368 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 INPP5KQ9BT40 448 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 SERTAD3Q9UJW9 196 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 AP3M1Q9Y2T2 418 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 PCDHB14Q9Y5E9 798 aa17.22■□□□□ 0.35
HMGN1-206ENST00000431390 A0A1W2PRB8 838 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 PDPK1O15530 556 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 FOXS1O43638 330 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 CBFA2T3O75081 653 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 ANP32DO95626 131 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 CDKN2CP42773 168 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 PCBP4P57723 403 aaKnown RBP17.21■□□□□ 0.35
HMGN1-206ENST00000431390 CEACAM7Q14002 265 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 RUNDC3AQ59EK9 446 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 YOD1Q5VVQ6 348 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-206ENST00000431390 C18orf63Q68DL7 685 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 DNAJC14Q6Y2X3 702 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-206ENST00000431390 MSRB3Q8IXL7 192 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 CA13Q8N1Q1 262 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 OR1L3Q8NH93 324 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 ADAMTS14Q8WXS8 1223 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 CIDECQ96AQ7 238 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-206ENST00000431390 EXOSC8Q96B26 276 aaKnown RBP17.21■□□□□ 0.35
HMGN1-206ENST00000431390 MVB12AQ96EY5 273 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 PHF12Q96QT6 1004 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 SLC35C2Q9NQQ7 365 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 FGF21Q9NSA1 209 aa17.21■□□□□ 0.35
HMGN1-206ENST00000431390 ACSS1Q9NUB1 689 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms