RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PSD4Q8NDX1 1056 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 HUS1BQ8NHY5 278 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 ZNF721Q8TF20 911 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 SCYL1Q96KG9 808 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 MTERF1Q99551 399 aaKnown RBP10.93□□□□□ -0.66
HDAC4-202ENST00000430200 ALOXE3Q9BYJ1 711 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 OR8D2Q9GZM6 311 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 RAB17Q9H0T7 212 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 LYRM4Q9HD34 91 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 MYOTQ9UBF9 498 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 OPTCQ9UBM4 332 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 SUCOQ9UBS9 1254 aaKnown RBP10.93□□□□□ -0.66
HDAC4-202ENST00000430200 DMGDHQ9UI17 866 aaKnown RBP10.93□□□□□ -0.66
HDAC4-202ENST00000430200 UTP11Q9Y3A2 253 aaKnown RBP10.93□□□□□ -0.66
HDAC4-202ENST00000430200 ATG4BQ9Y4P1 393 aa10.93□□□□□ -0.66
HDAC4-202ENST00000430200 KLF2Q9Y5W3 355 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-202ENST00000430200 FAM166BA8MTA8 275 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 C17orf105B2RV13 164 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 FCHO1O14526 889 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 OR7A17O14581 309 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 TFECO14948 347 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 CTNSO60931 367 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 S100BP04271 92 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 IGKV3-11P04433 115 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 CELA3AP09093 270 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 CCL3P10147 92 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 ABOP16442 354 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 SSR2P43308 183 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 MAGEA12P43365 314 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 SSR4P51571 173 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 KRTAP10-9P60411 292 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 RPS13P62277 151 aaKnown RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 TNFRSF17Q02223 184 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 RBPJQ06330 500 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 NAB1Q13506 487 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 PFKFB4Q16877 469 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 C8orf74Q6P047 294 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 MED27Q6P2C8 311 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 RPTNQ6XPR3 784 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 GOLGA7Q7Z5G4 137 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 TBC1D1Q86TI0 1168 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 GHDCQ8N2G8 530 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 OR2M7Q8NG81 312 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 OR52B6Q8NGF0 335 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 C16orf52Q8NHV5 167 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 STAG3L4Q8TBR4 150 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 PPWD1Q96BP3 646 aaKnown RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 C16orf45Q96MC5 204 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 NSUN5Q96P11 429 aaKnown RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 CDK15Q96Q40 435 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 CAPS2Q9BXY5 557 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 CDC42EP4Q9H3Q1 356 aaKnown RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 ACSS3Q9H6R3 686 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 NMRAL1Q9HBL8 299 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 SEMA4BQ9NPR2 832 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 TNFRSF10DQ9UBN6 386 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 VTI1BQ9UEU0 232 aa10.92□□□□□ -0.66
HDAC4-202ENST00000430200 KLF13Q9Y2Y9 288 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-202ENST00000430200 A0A096LPK6 155 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 A0A0A6YYD5 115 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 CDC40O60508 579 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 ZFAND5O76080 213 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 PDE9AO76083 593 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 GBAP04062 536 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 IFNA16P05015 189 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 SBK3P0C264 359 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 CRABP2P29373 138 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 BSGP35613 385 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 RNF4P78317 190 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 CAV1Q03135 178 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 FOLH1Q04609 750 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 TRAF3Q13114 568 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 LAPTM5Q13571 262 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 UAP1Q16222 522 aaPredicted RBP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 ZNF750Q32MQ0 723 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 KRTCAP3Q53RY4 240 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 PAGE2BQ5JRK9 111 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 DEPDC1Q5TB30 811 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 MRM1Q6IN84 353 aaKnown RBP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 IL20RBQ6UXL0 311 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 SLC34A3Q8N130 599 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 TMEM156Q8N614 296 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 HORMAD2Q8N7B1 307 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 ACBD4Q8NC06 268 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 FAM98AQ8NCA5 519 aaKnown RBP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 OR14A16Q8NHC5 309 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 RHEBL1Q8TAI7 183 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 WDR20Q8TBZ3 569 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 ISL2Q96A47 359 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 TMEM125Q96AQ2 219 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 TBCDQ9BTW9 1192 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 TTTY12Q9BZ98 90 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 ZBTB26Q9HCK0 441 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 TEX10Q9NXF1 929 aaPredicted RBP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 CPSF2Q9P2I0 782 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms