RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CDKL1Q00532 357 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 CYP1B1Q16678 543 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 FLYWCH1Q4VC44 716 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 ABHD17CQ6PCB6 329 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 ZNF662Q6ZS27 426 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 IGDCC3Q8IVU1 814 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 RASGEF1CQ8N431 466 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 NKAPQ8N5F7 415 aaKnown RBP16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 GRK7Q8WTQ7 553 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 KIAA1191Q96A73 305 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 CFAP36Q96G28 342 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 DMRT3Q9NQL9 472 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 RPH3AQ9Y2J0 694 aaPredicted RBP16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 OARD1Q9Y530 152 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 HSPB2A8KAH6 182 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 SYT5O00445 386 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 LDB3O75112 727 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 BMP5P22003 454 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 KCNJ2P63252 427 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 ID2Q02363 134 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 ASPHQ12797 758 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 SERTAD2Q14140 314 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 PPP1R7Q15435 360 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 HSPB2Q16082 182 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 ADPRMQ3LIE5 342 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 HP1BP3Q5SSJ5 553 aaPredicted RBP16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 FBXW10Q5XX13 1052 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 ULK2Q8IYT8 1036 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 RELL2Q8NC24 303 aaPredicted RBP16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 FAM222BQ8WU58 562 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 LRRC46Q96FV0 321 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 NAP1L3Q99457 506 aaPredicted RBP16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 NT5DC2Q9H857 520 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 CTNNAL1Q9UBT7 734 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 ASIC3Q9UHC3 531 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 CBLCQ9ULV8 474 aa16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 BOKQ9UMX3 212 aaPredicted RBP16.89■□□□□ 0.29
UPK3BP1-201ENST00000428678 FBN3Q75N90 2809 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 DVL2O14641 736 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 TBX6O95947 436 aaPredicted RBP16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 RFPL3SP0C7P2 107 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 SLC6A12P48065 614 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 ASCL1P50553 236 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 TGM3Q08188 693 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 ZNF460Q14592 562 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 TSNQ15631 228 aaKnown RBP16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 PIGGQ5H8A4 983 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 PRAMEF20Q5VT98 475 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 SLC22A10Q63ZE4 541 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 ADNP2Q6IQ32 1131 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 TRMT10BQ6PF06 316 aaKnown RBP16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 PAMR1Q6UXH9 720 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 VN1R5Q7Z5H4 357 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 CAMKMTQ7Z624 323 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 ADAMTSL2Q86TH1 951 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 FBXW8Q8N3Y1 598 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 LIX1Q8N485 282 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 ANKRD7Q92527 254 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 RNASE6Q93091 150 aaKnown RBP16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 RHBDF1Q96CC6 855 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 MBD6Q96DN6 1003 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 PBKQ96KB5 322 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 CAPZA3Q96KX2 299 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 F2RL3Q96RI0 385 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 SH3GL2Q99962 352 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 SLC6A15Q9H2J7 730 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 ZNF703Q9H7S9 590 aaPredicted RBP16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 PLAC1Q9HBJ0 212 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 ZFP64Q9NPA5 681 aa16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 TRMT1Q9NXH9 659 aaKnown RBP16.88■□□□□ 0.29
UPK3BP1-201ENST00000428678 NCF1BA6NI72 391 aaPredicted RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 NCF1CA8MVU1 366 aaPredicted RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 PGRMC1O00264 195 aaKnown RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 DNALI1O14645 258 aaPredicted RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 ETHE1O95571 254 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 COX7A2P14406 83 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 NCF1P14598 390 aaPredicted RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 TRPC1P48995 793 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 FNTAP49354 379 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 MPEG1Q2M385 716 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 SEM1Q6ZVN7 128 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 SLC22A8Q8TCC7 542 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 ZNF721Q8TF20 911 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 JSRP1Q96MG2 331 aaPredicted RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 CAPS2Q9BXY5 557 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 PITHD1Q9GZP4 211 aaPredicted RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 LYRM4Q9HD34 91 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 MTRF1LQ9UGC7 380 aaKnown RBP16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 CHMP2BQ9UQN3 213 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 TLN2Q9Y4G6 2542 aa16.87■□□□□ 0.29
UPK3BP1-201ENST00000428678 A0A1B0GTL3 188 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 CLGNO14967 610 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 RAF1P04049 648 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 TACR1P25103 407 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 ELK3P41970 407 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 KCNC1P48547 511 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 LTBQ06643 244 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 KEAP1Q14145 624 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms