RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 HMX2A2RU54 273 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 LRRC14BA6NHZ5 514 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 C17orf105B2RV13 164 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 HRKO00198 91 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 FGF17O60258 216 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 PRKRAO75569 313 aaKnown RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 GLSO94925 669 aaPredicted RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 PCNAP12004 261 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 HIST1H1TP22492 207 aaPredicted RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 SPRP35270 261 aaPredicted RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 PLTPP55058 493 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 RNF4P78317 190 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 IRF9Q00978 393 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 PCDH1Q08174 1060 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 STX4Q12846 297 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 ILF2Q12905 390 aaKnown RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 LAPTM5Q13571 262 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 SLMAPQ14BN4 828 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 UBAP2Q5T6F2 1119 aaKnown RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 GRTP1Q5TC63 336 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 CEP128Q6ZU80 1094 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 CENPLQ8N0S6 344 aaPredicted RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 C17orf53Q8N3J3 647 aaPredicted RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 OR7G3Q8NG95 312 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 OR14A16Q8NHC5 309 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 FBF1Q8TES7 1133 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 DOK4Q8TEW6 326 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 UBTD2Q8WUN7 234 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 KCTD4Q8WVF5 259 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 DAZLQ92904 295 aaKnown RBP14.38□□□□□ -0.11
SEC13-210ENST00000428626 NXNL1Q96CM4 212 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 TBCDQ9BTW9 1192 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 ZDHHC11Q9H8X9 412 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 NUDT4Q9NZJ9 180 aa14.38□□□□□ -0.11
SEC13-210ENST00000428626 WASHC1A8K0Z3 465 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 SUPT3HB4E1H0 165 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 KERAO60938 352 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 SUPT3HO75486 399 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 CELA3AP09093 270 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 GSTA2P09210 222 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 MAGEA4P43358 317 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 PPIAP62937 165 aaKnown RBP14.37□□□□□ -0.11
SEC13-210ENST00000428626 IGLV3-21P80748 117 aaPredicted RBP14.37□□□□□ -0.11
SEC13-210ENST00000428626 GUCY2DQ02846 1103 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 FOXO1Q12778 655 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 PAGE2BQ5JRK9 111 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 MED27Q6P2C8 311 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 CCDC25Q86WR0 208 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 STAG3L4Q8TBR4 150 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 PPWD1Q96BP3 646 aaKnown RBP14.37□□□□□ -0.11
SEC13-210ENST00000428626 SPOCK3Q9BQ16 436 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 ZNF717Q9BY31 904 aaPredicted RBP14.37□□□□□ -0.11
SEC13-210ENST00000428626 TTTY12Q9BZ98 90 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 UCK2Q9BZX2 261 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 SEMA4BQ9NPR2 832 aaPredicted RBP14.37□□□□□ -0.11
SEC13-210ENST00000428626 NPDC1Q9NQX5 325 aaPredicted RBP14.37□□□□□ -0.11
SEC13-210ENST00000428626 TNFRSF10DQ9UBN6 386 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 ANKRD17O75179 2603 aaKnown RBP14.37□□□□□ -0.11
SEC13-210ENST00000428626 NCKAP5O14513 1909 aa14.37□□□□□ -0.11
SEC13-210ENST00000428626 NKX2-6A6NCS4 301 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 K7EPI3 171 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 S100BP04271 92 aaPredicted RBP14.36□□□□□ -0.11
SEC13-210ENST00000428626 IGKV3-11P04433 115 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 LTA4HP09960 611 aaKnown RBP14.36□□□□□ -0.11
SEC13-210ENST00000428626 CCL3P10147 92 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 IGFBP2P18065 325 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 TNNI3P19429 210 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 HPDP32754 393 aaPredicted RBP14.36□□□□□ -0.11
SEC13-210ENST00000428626 SSR2P43308 183 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 DNASE1L1P49184 302 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 HNRNPH2P55795 449 aaKnown RBP14.36□□□□□ -0.11
SEC13-210ENST00000428626 TFF3Q07654 80 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 TGM3Q08188 693 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 RCN2Q14257 317 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 HIST2H2ACQ16777 129 aaPredicted RBP14.36□□□□□ -0.11
SEC13-210ENST00000428626 TMEM35AQ53FP2 167 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 DEPDC1Q5TB30 811 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 KHDRBS2Q5VWX1 349 aaKnown RBP14.36□□□□□ -0.11
SEC13-210ENST00000428626 C18orf63Q68DL7 685 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 HIST2H2AA3Q6FI13 130 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 GRHL2Q6ISB3 625 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 ARHGAP11AQ6P4F7 1023 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 ADGRD1Q6QNK2 874 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 LYPD8Q6UX82 237 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 RAPH1Q70E73 1250 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 MAATS1Q7Z4T9 603 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 CCDC71Q8IV32 467 aaPredicted RBP14.36□□□□□ -0.11
SEC13-210ENST00000428626 C9orf40Q8IXQ3 194 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 GPALPP1Q8IXQ4 340 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 TMEM251Q8N6I4 163 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 OR8K3Q8NH51 312 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 HUS1BQ8NHY5 278 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 CA5BP1Q8WTZ4 195 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 UCN3Q969E3 161 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 ROGDIQ9GZN7 287 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 OPTCQ9UBM4 332 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 RNF6Q9Y252 685 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 ATG4BQ9Y4P1 393 aa14.36□□□□□ -0.11
SEC13-210ENST00000428626 NPIPA2E9PIF3 369 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 NPIPA3F8WFD2 350 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms