RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PROM1O43490 865 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 DLX3O60479 287 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 PLIN3O60664 434 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 SLITRK5O94991 958 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 SIX3O95343 332 aaPredicted RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ESRRBO95718 433 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ITGAMP11215 1152 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 EDN3P14138 238 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 PCSK2P16519 638 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 SSR2P43308 183 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 STT3AP46977 705 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 RAP1GDS1P52306 607 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ARG2P78540 354 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 EEF1A2Q05639 463 aaKnown RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 CPSF6Q16630 551 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 MPEG1Q2M385 716 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 MFSD4BQ5TF39 518 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ZYG11AQ6WRX3 759 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF793Q6ZN11 406 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 LANCL3Q6ZV70 420 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 CUZD1Q86UP6 607 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 RPS19BP1Q86WX3 136 aaKnown RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 PRSS58Q8IYP2 241 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 SLC15A4Q8N697 577 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 BCORP1Q8N888 145 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 TMEM178AQ8NBL3 297 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 MDS2Q8NDY4 140 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 OR52B6Q8NGF0 335 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 CCT6BQ92526 530 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 EXT2Q93063 718 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 TSLPQ969D9 159 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 SNRNP40Q96DI7 357 aaKnown RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 PHF21BQ96EK2 531 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 RNF31Q96EP0 1072 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 SCMH1Q96GD3 660 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 SCYL1Q96KG9 808 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 CCT7Q99832 543 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ELOVL6Q9H5J4 265 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 RPF2Q9H7B2 306 aaKnown RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 NECTIN3Q9NQS3 549 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF358Q9NW07 568 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 EHD3Q9NZN3 535 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 YARS2Q9Y2Z4 477 aaKnown RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ASB4Q9Y574 426 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 COPG1Q9Y678 874 aaKnown RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF860A6NHJ4 632 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 G3V2L1 256 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 PRAMEF2O60811 474 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 B4GALT2O60909 372 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 ULK1O75385 1050 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 ZFAND5O76080 213 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 SEC24DO94855 1032 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-203ENST00000428014 CBX6O95503 412 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 GPR75O95800 540 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 DDAH2O95865 285 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 TGFB1P01137 390 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 PROCP04070 461 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 IGKV3-11P04433 115 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 SLC35E2P0CK97 266 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 NR1D1P20393 614 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 CPN2P22792 545 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 PRPH2P23942 346 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 CERS1P27544 350 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 HLCSP50747 726 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 FOXL2P58012 376 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 MLF1P58340 268 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 VSNL1P62760 191 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 PLIN5Q00G26 463 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 STX4Q12846 297 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 SLC13A2Q13183 592 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 SLAMF1Q13291 335 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 UNC50Q53HI1 259 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 KRTCAP3Q53RY4 240 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 SPIN4Q56A73 249 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 OR52E8Q6IFG1 317 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 GPRIN3Q6ZVF9 776 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 TRIM46Q7Z4K8 759 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 TMEM151BQ8IW70 566 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 FAM26EQ8N5C1 309 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 GOLM1Q8NBJ4 401 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 OR4F6Q8NGB9 312 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 OR1N1Q8NGS0 311 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 THAP3Q8WTV1 239 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-203ENST00000428014 UBLCP1Q8WVY7 318 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-203ENST00000428014 MRRFQ96E11 262 aaKnown RBP8.53□□□□□ -1.04
SMC1A-203ENST00000428014 RBM18Q96H35 190 aaKnown RBP8.53□□□□□ -1.04
SMC1A-203ENST00000428014 POM121Q96HA1 1249 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 FBXL20Q96IG2 436 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 SGCZQ96LD1 299 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 MTERF1Q99551 399 aaKnown RBP8.53□□□□□ -1.04
SMC1A-203ENST00000428014 UTP23Q9BRU9 249 aaKnown RBP8.53□□□□□ -1.04
SMC1A-203ENST00000428014 KCNK13Q9HB14 408 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 OXSMQ9NWU1 459 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 VPS29Q9UBQ0 182 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 MCM8Q9UJA3 840 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF225Q9UK10 706 aa8.53□□□□□ -1.04
SMC1A-203ENST00000428014 PSME2Q9UL46 239 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms