RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 CCDC25Q86WR0 208 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 HORMAD1Q86X24 394 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 LRRC6Q86X45 466 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 GPSM1Q86YR5 675 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 RASGRP3Q8IV61 690 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 GALNT15Q8N3T1 639 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 RYBPQ8N488 228 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 EXD3Q8N9H8 876 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PPHLN1Q8NEY8 458 aaKnown RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 OR4K2Q8NGD2 314 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 BLOC1S5Q8TDH9 187 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PDCD6IPQ8WUM4 868 aaKnown RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 LPGAT1Q92604 370 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 KAT2AQ92830 837 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PGM2Q96G03 612 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 URB1-AS1Q96HZ7 61 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 COX14Q96I36 57 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 BIRC8Q96P09 236 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ZIM3Q96PE6 472 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 VPS35Q96QK1 796 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 CYTH2Q99418 400 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ROPN1BQ9BZX4 212 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ABCG8Q9H221 673 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 P2RY12Q9H244 342 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 SUDS3Q9H7L9 328 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PPCSQ9HAB8 311 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 EBF2Q9HAK2 575 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ROPN1Q9HAT0 212 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 UGT1A7Q9HAW7 530 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 UGT1A10Q9HAW8 530 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 UGT1A8Q9HAW9 530 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 SGK2Q9HBY8 427 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PREBQ9HCU5 417 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 FBXL12Q9NXK8 326 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 WSB2Q9NYS7 404 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 MDFICQ9P1T7 246 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 SLC24A2Q9UI40 661 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 G3BP2Q9UN86 482 aaKnown RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 MAN2B2Q9Y2E5 1009 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 BSNQ9UPA5 3926 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 SETD2Q9BYW2 2564 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 SCN8AQ9UQD0 1980 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PCDH15Q96QU1 1955 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 A0A087WUV0 522 aaPredicted RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CCL22O00626 93 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 RAD51BO15315 384 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 STX7O15400 261 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 RRP8O43159 456 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 BUD23O43709 281 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 SH3BP5O60239 455 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 RNASEH1O60930 286 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ZNF217O75362 1048 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 PIAS1O75925 651 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 SRP72O76094 671 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 GOT2P00505 430 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 LCKP06239 509 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ITGA5P08648 1049 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 PRSS56P0CW18 603 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ERVK-10P10266 1014 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 GP1BBP13224 206 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 OGNP20774 298 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 RPS3P23396 243 aaKnown RBP eCLIP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 OXTRP30559 389 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 STX2P32856 288 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ACSL1P33121 698 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 EIF2S3P41091 472 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 PTGER3P43115 390 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CSE1LP55060 971 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 RPS21P63220 83 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 RPL36AP83881 106 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 SEMG2Q02383 582 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CACNG1Q06432 222 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CRYZQ08257 329 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 DNAJC3Q13217 504 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 EFTUD2Q15029 972 aaKnown RBP eCLIP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CHRNA6Q15825 494 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 POM121L1PQ3SYA9 428 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 TTC31Q49AM3 519 aaPredicted RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ATP13A5Q4VNC0 1218 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 HSP90AA5PQ58FG0 334 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ZNF789Q5FWF6 425 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CFAP58Q5T655 872 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 SEL1L3Q68CR1 1132 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ERAP2Q6P179 960 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 AFTPHQ6ULP2 937 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 PACS1Q6VY07 963 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 SNX20Q7Z614 316 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ABI3BPQ7Z7G0 1075 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CUZD1Q86UP6 607 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 KCNMB4Q86W47 210 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ZC3HC1Q86WB0 502 aaKnown RBP5.26□□□□□ -1.57
C9orf3-205ENST00000427193 MARCH9Q86YJ5 346 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 DENND6AQ8IWF6 608 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 ADGRF3Q8IZF5 1079 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 CNPY4Q8N129 248 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 NDUFAF2Q8N183 169 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 TRAM1L1Q8N609 369 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 GPATCH11Q8N954 259 aa5.26□□□□□ -1.57
C9orf3-205ENST00000427193 DENND6BQ8NEG7 585 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 554.3 ms