RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 VMP1Q96GC9 406 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 DDX31Q9H8H2 851 aaKnown RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 LIN28AQ9H9Z2 209 aaKnown RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 SEMA4BQ9NPR2 832 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 PPT2Q9UMR5 302 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 OSGIN2Q9Y236 505 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 SLC5A6Q9Y289 635 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 USP9YO00507 2555 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 PTPN13Q12923 2485 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 ESPL1Q14674 2120 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 DOPEY2Q9Y3R5 2298 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 ASPDHA6ND91 283 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 FOXO6A8MYZ6 492 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 DLX3O60479 287 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 SHBGP04278 402 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 IFNA16P05015 189 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 TSPAN8P19075 237 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 HLCSP50747 726 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 CCNG1P51959 295 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 RAP1GDS1P52306 607 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 STX4Q12846 297 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 UNC50Q53HI1 259 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 DGAT2L6Q6ZPD8 337 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 SH2D5Q6ZV89 423 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 MILR1Q7Z6M3 343 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 TMEM132CQ8N3T6 1108 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 OR4F6Q8NGB9 312 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 RPF2Q9H7B2 306 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 PRM3Q9NNZ6 103 aa17.07■□□□□ 0.32
SMARCAL1-205ENST00000425815 NBPF19A0A087WUL8 3843 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 A0A1W2PPM1 405 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 A0A1W2PR48 441 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 GOLGA8RI6L899 631 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 ZFAND5O76080 213 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 CRYABP02511 175 aaKnown RBP17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 STSP08842 583 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 GP1BBP13224 206 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 CD46P15529 392 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 HSD17B3P37058 310 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 CYB561P49447 251 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 SERTAD2Q14140 314 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 GGTA1PQ4G0N0 100 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 FRG2Q64ET8 278 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 HIST2H2BCQ6DN03 193 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 LETMD1Q6P1Q0 360 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 GALNTL5Q7Z4T8 443 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 MORN4Q8NDC4 146 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 FRG2BQ96QU4 278 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 FARSBQ9NSD9 589 aaKnown RBP17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 MS4A12Q9NXJ0 267 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 CLCA3PQ9Y6N3 262 aa17.06■□□□□ 0.32
SMARCAL1-205ENST00000425815 IQANK1A0A1B0GTG1 560 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 SYNDIG1LA6NDD5 238 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 C17orf105B2RV13 164 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 LRRTM2O43300 516 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 ITGA10O75578 1167 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 SLC25A12O75746 678 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 GBAP04062 536 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 FAM58BPP0C7Q3 252 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 PYGBP11216 843 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 TNFRSF17Q02223 184 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 C4orf17Q53FE4 359 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 RNFT1Q5M7Z0 435 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 ZNF678Q5SXM1 525 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 TEX35Q5T0J7 233 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 ZNF721Q8TF20 911 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 TANKQ92844 425 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 DAZLQ92904 295 aaKnown RBP17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 PPWD1Q96BP3 646 aaKnown RBP17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 CENPKQ9BS16 269 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 PSMC3IPQ9P2W1 217 aaPredicted RBP17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 TBK1Q9UHD2 729 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 SPACA6W5XKT8 324 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 POLEQ07864 2286 aa17.05■□□□□ 0.32
SMARCAL1-205ENST00000425815 FCHO1O14526 889 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 NME2P1O60361 137 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 ZNF354AO60765 605 aaPredicted RBP17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 TNNI3P19429 210 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 NME2P22392 152 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 STT3AP46977 705 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 HERVK_113P63132 956 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 PHEXP78562 749 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 FOLH1Q04609 750 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 CLCQ05315 142 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 MAPKAPK3Q16644 382 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 MDGA2Q7Z553 956 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 LCA5Q86VQ0 697 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 SIAH3Q8IW03 269 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 HORMAD2Q8N7B1 307 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 TMEM178AQ8NBL3 297 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 OR14A16Q8NHC5 309 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 SLC2A12Q8TD20 617 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 ACMSDQ8TDX5 336 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 TRPC4APQ8TEL6 797 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 DOK4Q8TEW6 326 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 SREK1Q8WXA9 508 aaKnown RBP17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 SENP5Q96HI0 755 aaPredicted RBP17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 C5orf34Q96MH7 638 aa17.04■□□□□ 0.32
SMARCAL1-205ENST00000425815 FRMD6Q96NE9 622 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms