RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 C12orf76Q8N812 135 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SYT14Q8NB59 555 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 COLGALT1Q8NBJ5 622 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 OR4N2Q8NGD1 307 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 VANGL1Q8TAA9 524 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 HM13Q8TCT9 377 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PROX1Q92786 737 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SLCO2A1Q92959 643 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SLC38A4Q969I6 547 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MCHR2Q969V1 340 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 RFT1Q96AA3 541 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 RNF183Q96D59 192 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 LMLNQ96KR4 655 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 GUCD1Q96NT3 240 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 DUX5Q96PT3 197 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SNX18Q96RF0 628 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CCNL2Q96S94 520 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 RTP3Q9BQQ7 232 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CBWD1Q9BRT8 395 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CENPKQ9BS16 269 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 BBS2Q9BXC9 721 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 ACTRT3Q9BYD9 372 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SLC39A8Q9C0K1 460 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MFFQ9GZY8 342 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 SPRTNQ9H040 489 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CENPHQ9H3R5 247 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TXNRD2Q9NNW7 524 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 DNAJC4Q9NNZ3 241 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TUBG2Q9NRH3 451 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 C20orf96Q9NUD7 363 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.46□□□□□ -1.86
SF3B1-205ENST00000424674 FKBP14Q9NWM8 211 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 HIF1ANQ9NWT6 349 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 OSER1Q9NX31 292 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PISDQ9UG56 409 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 CYTH4Q9UIA0 394 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 AMFRQ9UKV5 643 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 PCDHA7Q9UN72 937 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 RNF24Q9Y225 148 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 ADCY9O60503 1353 aa3.46□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM120BA0PK00 339 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM202A6NGA9 273 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TRPC5OSA6NMA1 111 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 EIF4E1BA6NMX2 242 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 A8MU76 341 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 A8MXQ7 604 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 NPIPA2E9PIF3 369 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 BCKDKO14874 412 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 XRCC3O43542 346 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 KDELR3O43731 214 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ATP2C2O75185 946 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GLRA3O75311 464 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TM7SF2O76062 418 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 DDNO94850 711 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 LCA5LO95447 670 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ERBB2P04626 1255 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CHRNGP07510 517 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 APRTP07741 180 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ANXA4P09525 319 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 NUDT17P0C025 328 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 FCGR1AP12314 374 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CCNB1P14635 433 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 EZRP15311 586 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GPD1P21695 349 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ACKR3P25106 362 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CHATP28329 748 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SSTR1P30872 391 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 LCN1P31025 176 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GRIA3P42263 894 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 RPL21P46778 160 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GPR12P47775 334 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 KCNJ3P48549 501 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 RGS19P49795 217 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TNFSF10P50591 281 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 THOP1P52888 689 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 KCNK10P57789 538 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PROK1P58294 105 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ARPC4P59998 168 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 WDR5P61964 334 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SULT2A1Q06520 285 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ILF2Q12905 390 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 FOXF2Q12947 444 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GAGE2BQ13066 116 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ITGB3BPQ13352 177 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 RCAN2Q14206 197 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ELAVL3Q14576 367 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TGFBIQ15582 683 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 NPTX1Q15818 432 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 STX1AQ16623 288 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM44Q2T9K0 475 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GAGE2EQ4V326 116 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 EPHA10Q5JZY3 1008 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM63BQ5T3F8 832 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 HIST2H2AA3Q6FI13 130 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PYHIN1Q6K0P9 492 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CES5AQ6NT32 575 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GAGE2AQ6NT46 116 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 RNASEKQ6P5S7 137 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM71Q6P5X7 295 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CCDC137Q6PK04 289 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms