RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 DSC1Q08554 894 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 PUM1Q14671 1186 aaKnown RBP eCLIP15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 SLC5A12Q1EHB4 618 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 CDKL4Q5MAI5 379 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 ANXA8L1Q5VT79 327 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 MEDAGQ5VYS4 303 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 CNIH2Q6PI25 160 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 C19orf18Q8NEA5 215 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 HUS1BQ8NHY5 278 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 WFDC5Q8TCV5 224 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 GTPBP2Q9BX10 602 aaKnown RBP15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 ANKRA2Q9H9E1 313 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 ING3Q9NXR8 418 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 AP1M2Q9Y6Q5 423 aa15.9■□□□□ 0.14
NPC1L1-203ENST00000423141 NPIPB15A6NHN6 443 aaPredicted RBP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 B8ZZF3 427 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 SEMA7AO75326 666 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 MTX2O75431 263 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 PDE9AO76083 593 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 ARSBP15848 533 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 HNMTP50135 292 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 RBBP4Q09028 425 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 FAM110CQ1W6H9 321 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 OR2G6Q5TZ20 316 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 FAM180BQ6P0A1 224 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 TPGS1Q6ZTW0 290 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 TMEM145Q8NBT3 493 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 OMA1Q96E52 524 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 C1GALT1C1Q96EU7 318 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 QRFPRQ96P65 431 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 RSPO3Q9BXY4 272 aaPredicted RBP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 GPR62Q9BZJ7 368 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 LAMA3Q16787 3333 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 HELZP42694 1942 aaKnown RBP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 SLC38A8A6NNN8 435 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 SHOXO15266 292 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 TEX28O15482 410 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 LYRM1O43325 122 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 HPGDSO60760 199 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 C8GP07360 202 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 OSMP13725 252 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 MYL12AP19105 171 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 M6PRP20645 277 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 RRAS2P62070 204 aaPredicted RBP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 MAP2K5Q13163 448 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 C1DQ13901 141 aaKnown RBP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 RPS26P11Q5JNZ5 115 aaPredicted RBP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 LYPLAL1Q5VWZ2 237 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 HSDL2Q6YN16 418 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 CHST9Q7L1S5 443 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 OR8H1Q8NGG4 311 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 OR52N2Q8NGI0 321 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 TM9SF4Q92544 642 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 PPP1R3EQ9H7J1 279 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 SGK2Q9HBY8 427 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 ENOPH1Q9UHY7 261 aa15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 RPL36Q9Y3U8 105 aaKnown RBP15.89■□□□□ 0.13
NPC1L1-203ENST00000423141 RNASET2O00584 256 aaKnown RBP15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 NCR1O76036 304 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 RHCEP18577 417 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 AP2S1P53680 142 aaPredicted RBP15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 ABATP80404 500 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 GPR33Q49SQ1 333 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 MORN1Q5T089 497 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 ZNF730Q6ZMV8 503 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 IDO2Q6ZQW0 420 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 OTOP2Q7RTS6 562 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 DDX53Q86TM3 631 aaKnown RBP15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 C9orf62Q8N4C0 152 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 KCTD7Q96MP8 289 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 WRAP53Q9BUR4 548 aaKnown RBP15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 IFNW1P05000 195 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 ZNF8P17098 575 aaPredicted RBP15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 STK19P49842 368 aaPredicted RBP15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 CLDN20P56880 219 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 MPEG1Q2M385 716 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 CRTC2Q53ET0 693 aaPredicted RBP15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 CRB2Q5IJ48 1285 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 TMEM201Q5SNT2 666 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 ADGRF1Q5T601 910 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 GLB1LQ6UWU2 654 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 CASP12Q6UXS9 341 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 CAMKMTQ7Z624 323 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 TIGD4Q8IY51 512 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 ZFP41Q8N8Y5 198 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 DUSP18Q8NEJ0 188 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 OR52I1Q8NGK6 324 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 MED8Q96G25 268 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 PTPN18Q99952 460 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 ZDHHC3Q9NYG2 299 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 TVP23BQ9NYZ1 205 aa15.88■□□□□ 0.13
NPC1L1-203ENST00000423141 RFXAPO00287 272 aa15.87■□□□□ 0.13
NPC1L1-203ENST00000423141 SAP18O00422 153 aaKnown RBP15.87■□□□□ 0.13
NPC1L1-203ENST00000423141 KPNA5O15131 536 aa15.87■□□□□ 0.13
NPC1L1-203ENST00000423141 TLX2O43763 284 aaPredicted RBP15.87■□□□□ 0.13
NPC1L1-203ENST00000423141 PRKYO43930 277 aa15.87■□□□□ 0.13
NPC1L1-203ENST00000423141 OR10H3O60404 316 aa15.87■□□□□ 0.13
NPC1L1-203ENST00000423141 TBL1XO60907 577 aa15.87■□□□□ 0.13
NPC1L1-203ENST00000423141 CPEP16870 476 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms