RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MKL2Q9ULH7 1088 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 MMACHCQ9Y4U1 282 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 OR2W5A6NFC9 320 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 CREG1O75629 220 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 HEXBP07686 556 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 IL3P08700 152 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 LBPP18428 481 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 TLX1P31314 330 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-202ENST00000422991 LSP1P33241 339 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 IDH3AP50213 366 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 EMP2P54851 167 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 HSD17B7P56937 341 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 MAD2L1Q13257 205 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-202ENST00000422991 RIPOR1Q6ZS17 1223 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 MMP21Q8N119 569 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 RFWD2Q8NHY2 731 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 STON2Q8WXE9 905 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 THOC1Q96FV9 657 aaKnown RBP15.98■□□□□ 0.15
COL7A1-202ENST00000422991 CHMP6Q96FZ7 201 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 OR52B2Q96RD2 323 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 SIKE1Q9BRV8 207 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 TRIM55Q9BYV6 548 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 RPF2Q9H7B2 306 aaKnown RBP15.98■□□□□ 0.15
COL7A1-202ENST00000422991 PRDM9Q9NQV7 894 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 PRTFDC1Q9NRG1 225 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 SEMA3GQ9NS98 782 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 NOP53Q9NZM5 478 aaKnown RBP15.98■□□□□ 0.15
COL7A1-202ENST00000422991 WBP11Q9Y2W2 641 aaKnown RBP15.98■□□□□ 0.15
COL7A1-202ENST00000422991 PCDHA9Q9Y5H5 950 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 FAM208BQ5VWN6 2430 aa15.98■□□□□ 0.15
COL7A1-202ENST00000422991 PCSK5Q92824 1860 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 IGKV3D-11A0A0A0MRZ8 115 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 CLDN4O14493 209 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 PRMT3O60678 531 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 ALDOCP09972 364 aaKnown RBP15.97■□□□□ 0.15
COL7A1-202ENST00000422991 TROVE2P10155 538 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL7A1-202ENST00000422991 GNGT1P63211 74 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 BTG2P78543 158 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 TLE3Q04726 772 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 IL23RQ5VWK5 629 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 OR52E8Q6IFG1 317 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 FAM71E1Q6IPT2 247 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 C19orf48Q6RUI8 117 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 IKBIPQ70UQ0 350 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 CLNKQ7Z7G1 428 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 LIX1Q8N485 282 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 CDC26Q8NHZ8 85 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 ADAMTS17Q8TE56 1095 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 TSLPQ969D9 159 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 EBF4Q9BQW3 602 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 FAIM2Q9BWQ8 316 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 WDR41Q9HAD4 459 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 HEY2Q9UBP5 337 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 DCTN4Q9UJW0 460 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 LHX6Q9UPM6 363 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 EIF3LQ9Y262 564 aaKnown RBP15.97■□□□□ 0.15
COL7A1-202ENST00000422991 CLDN16Q9Y5I7 305 aa15.97■□□□□ 0.15
COL7A1-202ENST00000422991 C1orf226A1L170 272 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 GLOD5A6NK44 160 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 TGFBR3LH3BV60 316 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 EFSO43281 561 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 CTNSO60931 367 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 ALOX12BO75342 701 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 IGHEP01854 428 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 PRPS2P11908 318 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 DRD2P14416 443 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 MAOAP21397 527 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 MMP11P24347 488 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 ASMTP46597 345 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 DIO3P55073 304 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 SLC13A2Q13183 592 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 SSPNQ14714 243 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 UGT8Q16880 541 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 LSM12Q3MHD2 195 aaKnown RBP15.96■□□□□ 0.15
COL7A1-202ENST00000422991 NXNQ6DKJ4 435 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 TMEM205Q6UW68 189 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 LRRC69Q6ZNQ3 347 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 ACAD11Q709F0 780 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 SPATA19Q7Z5L4 167 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 PPP1R32Q7Z5V6 425 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 PARP9Q8IXQ6 854 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 TMEM132CQ8N3T6 1108 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 PLPP5Q8NEB5 264 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 CEP70Q8NHQ1 597 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 CLHC1Q8NHS4 586 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 TANKQ92844 425 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 UCN3Q969E3 161 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 EGLN2Q96KS0 407 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 PTCHD1Q96NR3 888 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 TSSK3Q96PN8 268 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 CCDC28BQ9BUN5 200 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 KCNK13Q9HB14 408 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 TCF7L2Q9NQB0 619 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 NECTIN3Q9NQS3 549 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 BAIAP2L1Q9UHR4 511 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 CES1P1Q9UKY3 287 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 HS3ST3B1Q9Y662 390 aa15.96■□□□□ 0.15
COL7A1-202ENST00000422991 ZNF891A8MT65 544 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-202ENST00000422991 PCDH17O14917 1159 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 PGRMC2O15173 223 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms