RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 OR14A16Q8NHC5 309 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 UBTD2Q8WUN7 234 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 ITLN2Q8WWU7 325 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 ASB15Q8WXK1 588 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 ANKRD9Q96BM1 317 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 REPS1Q96D71 796 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 PHF21BQ96EK2 531 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 RBM18Q96H35 190 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 DGAT2Q96PD7 388 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 TSPYL1Q9H0U9 437 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 DEFB127Q9H1M4 99 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 CDC42EP4Q9H3Q1 356 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 ACSS3Q9H6R3 686 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 NOL11Q9H8H0 719 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 TRIM45Q9H8W5 580 aaPredicted RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 HPF1Q9NWY4 346 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 MYOTQ9UBF9 498 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 PPIEQ9UNP9 301 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 RNF11Q9Y3C5 154 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 CLDN16Q9Y5I7 305 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 TNPO3Q9Y5L0 923 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 PRRC2CQ9Y520 2896 aaKnown RBP8.64□□□□□ -1.03
NUP50-206ENST00000422489 DOPEY2Q9Y3R5 2298 aa8.64□□□□□ -1.03
NUP50-206ENST00000422489 ANKRD12Q6UB98 2062 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 SCN3AQ9NY46 2000 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 A0A1B0GTH9 108 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 WASHC1A8K0Z3 465 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 G3V3Y1 287 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 PLPP1O14494 284 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 PRRG2O14669 202 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 DYRK3O43781 588 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 HS6ST1O60243 411 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 FGF17O60258 216 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 SMIM24O75264 130 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 KRT38O76015 456 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 OR6B1O95007 311 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 CLDN9O95484 217 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ETHE1O95571 254 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ALDOAP04075 364 aaKnown RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 SNRPB2P08579 225 aaKnown RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 RBP1P09455 135 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 COX7A2P14406 83 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 HTR1EP28566 365 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 PTGER1P34995 402 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 PIK3CBP42338 1070 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 SERPINB9P50453 376 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ART3Q13508 389 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 NAA30Q147X3 362 aaPredicted RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 PCBP2Q15366 365 aaKnown RBP eCLIP8.63□□□□□ -1.036e-7■■■■■ 32.5
NUP50-206ENST00000422489 SGO1Q5FBB7 561 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 C18orf63Q68DL7 685 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 CYP20A1Q6UW02 462 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 RPTNQ6XPR3 784 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 NCCRP1Q6ZVX7 275 aaPredicted RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 TAOK1Q7L7X3 1001 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 DOLPP1Q86YN1 238 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 SIAH3Q8IW03 269 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ZNF808Q8N4W9 903 aaPredicted RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 POGLUT1Q8NBL1 392 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 C7orf57Q8NEG2 295 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 SLC2A12Q8TD20 617 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 AGAP11Q8TF27 550 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 MARVELD3Q96A59 401 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 SENP5Q96HI0 755 aaPredicted RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 GPR78Q96P69 363 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 CDK15Q96Q40 435 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 RASL10BQ96S79 203 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 FMO2Q99518 471 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 RUBCNLQ9H714 662 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 RPF2Q9H7B2 306 aaKnown RBP8.63□□□□□ -1.03
NUP50-206ENST00000422489 DMRT3Q9NQL9 472 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 MS4A12Q9NXJ0 267 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 COPS7AQ9UBW8 275 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 PHF11Q9UIL8 331 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ENTPD4Q9Y227 616 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ZNF835Q9Y2P0 537 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ATG4BQ9Y4P1 393 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 PTPN13Q12923 2485 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 ESPL1Q14674 2120 aa8.63□□□□□ -1.03
NUP50-206ENST00000422489 NUP210LQ5VU65 1888 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 A0A087WUV0 522 aaPredicted RBP8.62□□□□□ -1.03
NUP50-206ENST00000422489 IQANK1A0A1B0GTG1 560 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 CCDC189A1A4V9 331 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 GLOD5A6NK44 160 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 TMEM200CA6NKL6 621 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 FAM166BA8MTA8 275 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 TRIM49D1C9J1S8 452 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 H0YIV9 168 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 HNRNPRO43390 633 aaKnown RBP8.62□□□□□ -1.03
NUP50-206ENST00000422489 PROM1O43490 865 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 KLK8O60259 260 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 OR10H2O60403 315 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 EEDO75530 441 aaKnown RBP8.62□□□□□ -1.03
NUP50-206ENST00000422489 PRKRAO75569 313 aaKnown RBP8.62□□□□□ -1.03
NUP50-206ENST00000422489 GBAP04062 536 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 TUBB4AP04350 444 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 TPOP07202 933 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 FAM58BPP0C7Q3 252 aa8.62□□□□□ -1.03
NUP50-206ENST00000422489 ALOX15P16050 662 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms