RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 ACBD3Q9H3P7 528 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 TP53TG5Q9Y2B4 290 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 ASB4Q9Y574 426 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 NBEAQ8NFP9 2946 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 GNG14A0A1W2PPG7 69 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 A0A1W2PR48 441 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 TCRBV16S1A1N1A0A5B0 115 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 SERTM1A2A2V5 107 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 GLOD5A6NK44 160 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 TMEM114B3SHH9 223 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 RGS14O43566 566 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 PCDH7O60245 1069 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 MYO1DO94832 1006 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 ALPPP05187 535 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 LINC00032P0C843 101 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 PRR35P0CG20 571 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 NR1D1P20393 614 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 GRK2P25098 689 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 Q0VFX4 171 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 SERTAD2Q14140 314 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 EXT1Q16394 746 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 SOWAHCQ53LP3 525 aaPredicted RBP14.77□□□□□ -0.05
BRAT1-202ENST00000421712 KANK2Q63ZY3 851 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 MRM1Q6IN84 353 aaKnown RBP14.77□□□□□ -0.05
BRAT1-202ENST00000421712 TCTN3Q6NUS6 607 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 ASB18Q6ZVZ8 466 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 TRIM46Q7Z4K8 759 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 SCUBE1Q8IWY4 988 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 IMMP1LQ96LU5 166 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 NUDT9Q9BW91 350 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 ZDHHC2Q9UIJ5 367 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 ZNF451Q9Y4E5 1061 aa14.77□□□□□ -0.05
BRAT1-202ENST00000421712 PCDHGA9Q9Y5G4 932 aaKnown RBP14.77□□□□□ -0.05
BRAT1-202ENST00000421712 IGKV3D-11A0A0A0MRZ8 115 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 A0A1W2PQ72 361 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 A8MUI8 341 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 TMEM233B4DJY2 109 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 K7EM74 188 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 ITM2AO43736 263 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 SEC22BO75396 215 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 LYPLA1O75608 230 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-202ENST00000421712 CEACAM4O75871 244 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 AIFM1O95831 613 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 SERPINA7P05543 415 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 CELA2AP08217 269 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 FGF4P08620 206 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 PPP2R1BP30154 601 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 SLC1A6P48664 564 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 ALDH9A1P49189 494 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 SLC18A1P54219 525 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 WDR4P57081 412 aaKnown RBP14.76□□□□□ -0.05
BRAT1-202ENST00000421712 NFATC3Q12968 1075 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 TTMPQ5BVD1 217 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 VWA5B1Q5TIE3 1220 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 AGAP7PQ5VUJ5 663 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 PLAG1Q6DJT9 500 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 SIRT6Q8N6T7 355 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 AMER2Q8N7J2 671 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 BRIX1Q8TDN6 353 aaKnown RBP14.76□□□□□ -0.05
BRAT1-202ENST00000421712 TWIST2Q8WVJ9 160 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 ANKRD9Q96BM1 317 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-202ENST00000421712 AGAP4Q96P64 663 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 DGAT2Q96PD7 388 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 WDR77Q9BQA1 342 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-202ENST00000421712 FAIM2Q9BWQ8 316 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 EBPLQ9BY08 206 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 ILKAPQ9H0C8 392 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-202ENST00000421712 ZNF395Q9H8N7 513 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-202ENST00000421712 KCNK13Q9HB14 408 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 PTGFRNQ9P2B2 879 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 MCM8Q9UJA3 840 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 DNAJC15Q9Y5T4 150 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 PTGDR2Q9Y5Y4 395 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 CLCA3PQ9Y6N3 262 aa14.76□□□□□ -0.05
BRAT1-202ENST00000421712 ITPR1Q14643 2758 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 ATMQ13315 3056 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 SYNDIG1LA6NDD5 238 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 WASHC1A8K0Z3 465 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 HMGB1P1B2RPK0 211 aaPredicted RBP14.75□□□□□ -0.05
BRAT1-202ENST00000421712 TGFBR3LH3BV60 316 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 PGRMC2O15173 223 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 FGF17O60258 216 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 RSL1D1O76021 490 aaKnown RBP14.75□□□□□ -0.05
BRAT1-202ENST00000421712 PRB1P04280 392 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 ITGAMP11215 1152 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 PIK3R1P27986 724 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 TIA1P31483 386 aaKnown RBP eCLIP14.75□□□□□ -0.05
BRAT1-202ENST00000421712 ARRB2P32121 409 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 SOX8P57073 446 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 SLC26A5P58743 744 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 FOLH1Q04609 750 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 NR6A1Q15406 480 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 NDUFAF5Q5TEU4 345 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 RIPOR1Q6ZS17 1223 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 PTRH1Q86Y79 214 aaKnown RBP14.75□□□□□ -0.05
BRAT1-202ENST00000421712 TRIM42Q8IWZ5 723 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 C7orf57Q8NEG2 295 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 OR6Y1Q8NGX8 325 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 CDC26Q8NHZ8 85 aa14.75□□□□□ -0.05
BRAT1-202ENST00000421712 M1APQ8TC57 530 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms