RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PPP1R3AQ16821 1122 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF791Q3KP31 576 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ADPRMQ3LIE5 342 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 SHEQ5VZ18 495 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 CHSY3Q70JA7 882 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 CLNKQ7Z7G1 428 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 THOC6Q86W42 341 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 KLHDC8AQ8IYD2 350 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 GPATCH11Q8N954 259 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 NEIL3Q8TAT5 605 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 SLC2A12Q8TD20 617 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 MAIP1Q8WWC4 291 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 FAR2Q96K12 515 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 COX4I2Q96KJ9 171 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 SIGLEC10Q96LC7 697 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 TRIM54Q9BYV2 358 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 OR8D2Q9GZM6 311 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 SLC6A15Q9H2J7 730 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 EXO5Q9H790 373 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 NEUROD4Q9HD90 331 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZFP64Q9NPA5 681 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ACKR4Q9NPB9 350 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 IARS2Q9NSE4 1012 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 BEX4Q9NWD9 120 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ALKBH4Q9NXW9 302 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF629Q9UEG4 869 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 VTI1BQ9UEU0 232 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 IKZF3Q9UKT9 509 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 DYRK1BQ9Y463 629 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 MAD1L1Q9Y6D9 718 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 KCNE2Q9Y6J6 123 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ARHGAP21Q5T5U3 1957 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 A0A088AWK7 358 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 A0A1W2PPR1 153 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 TUBAL3A6NHL2 446 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CLCA1A8K7I4 914 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 GOLGA8MH3BSY2 632 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 B3GALT2O43825 422 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CTNSO60931 367 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 GUCA1CO95843 209 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 EPPINO95925 133 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 HRGP04196 525 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 IFNA16P05015 189 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CCDC175P0C221 793 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF10P21506 573 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 SAT1P21673 171 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 GSTM2P28161 218 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 TIMP3P35625 211 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF136P52737 540 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 PGGT1BP53609 377 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 LIM2P55344 173 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 WNT3P56703 355 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CRYMQ14894 314 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 PCBP2Q15366 365 aaKnown RBP eCLIP9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 MPEG1Q2M385 716 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 FBXW10Q5XX13 1052 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 TREML4Q6UXN2 200 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 MAATS1Q7Z4T9 603 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CXorf67Q86X51 503 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 LACC1Q8IV20 430 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CNTN4Q8IWV2 1026 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 TNIP2Q8NFZ5 429 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 TTLQ8NG68 377 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 OR5L2Q8NGL0 311 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 NUDT8Q8WV74 236 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CAPZA3Q96KX2 299 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 PROK2Q9HC23 129 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 HOMER3Q9NSC5 361 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 QPCTLQ9NXS2 382 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 BOKQ9UMX3 212 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 DAPP1Q9UN19 280 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLC22A14Q9Y267 594 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
TNFAIP3-202ENST00000420009 EML6Q6ZMW3 1958 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 AHRRA9YTQ3 701 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 C17orf105B2RV13 164 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 CLEC3AO75596 197 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 ETHE1O95571 254 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 LY6G6DO95868 133 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 KRT14P02533 472 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 AHSGP02765 367 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 CERS1P27544 350 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 PLA2G16P53816 162 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 KCNJ2P63252 427 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 NKX6-1P78426 367 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 CRYZQ08257 329 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 TBL3Q12788 808 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 SERTAD2Q14140 314 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 EFTUD2Q15029 972 aaKnown RBP eCLIP9.38□□□□□ -0.911e-10■□□□□ 10.5
TNFAIP3-202ENST00000420009 PIGGQ5H8A4 983 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 PRAMEF20Q5VT98 475 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 TTC27Q6P3X3 843 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 TMIGD1Q6UXZ0 262 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLCO4C1Q6ZQN7 724 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 VN1R5Q7Z5H4 357 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 GALNT7Q86SF2 657 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 KIF18BQ86Y91 864 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms