RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KIAA1524Q8TCG1 905 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 PCED1BQ96HM7 432 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 SPATA17Q96L03 361 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 PANX3Q96QZ0 392 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 RBM24Q9BX46 236 aaKnown RBP3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 VIPAS39Q9H9C1 493 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 UBE2TQ9NPD8 197 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 SH3GLB2Q9NR46 395 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 DHRS4-AS1Q9P1J3 65 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 GTF3C4Q9UKN8 822 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 SDR42E2A6NKP2 422 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 E9PAM4 449 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 CHUKO15111 745 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 TTI1O43156 1089 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 SLC7A4O43246 635 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 CCDC159P0C7I6 412 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR9G9P0C7N8 305 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 EZRP15311 586 aaKnown RBP3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 COPB2P35606 906 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 ELK3P41970 407 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 SLC1A6P48664 564 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 RPL27P61353 136 aaKnown RBP3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 ROR1Q01973 937 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 FASTKQ14296 549 aaKnown RBP3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 NFE2L1Q14494 772 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 SLC17A1Q14916 467 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 FAM133BQ5BKY9 247 aaKnown RBP3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 VITQ6UXI7 678 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 TMUB2Q71RG4 321 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 SIAH3Q8IW03 269 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 CD177Q8N6Q3 437 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 SPATA18Q8TC71 538 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 AGAP11Q8TF27 550 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 UBLCP1Q8WVY7 318 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 NTNG2Q96CW9 530 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 EPSTI1Q96J88 318 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 HSD17B14Q9BPX1 270 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 ADPGKQ9BRR6 497 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 UTP14AQ9BVJ6 771 aaKnown RBP3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF350Q9GZX5 532 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 DNAJC17Q9NVM6 304 aaKnown RBP3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 MIS18AQ9NYP9 233 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 VPS18Q9P253 973 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 ARMCX1Q9P291 453 aa3.34□□□□□ -1.87
HMGB1P49-201ENST00000418882 SH3PXD2BA1X283 911 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 NEDD8-MDP1E9PL57 170 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 CSDE1O75534 798 aaKnown RBP3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 THY1P04216 161 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 NUDT17P0C025 328 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 GPX3P22352 226 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 SERPINB6P35237 376 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 MATKP42679 507 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 ADARP55265 1226 aaKnown RBP3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 SPHARQ15513 63 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 ACKR1Q16570 336 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 TYSND1Q2T9J0 566 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 WSCD2Q2TBF2 565 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 HECTD3Q5T447 861 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 DCAF12Q5T6F0 453 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 KRT77Q7Z794 578 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 LRRC49Q8IUZ0 686 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 CCDC83Q8IWF9 413 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 NUP93Q8N1F7 819 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 CLEC1AQ8NC01 280 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 CCDC197Q8NCU1 140 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 TRPV3Q8NET8 790 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 RHOXF1Q8NHV9 184 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 FLVCR1-AS1Q8TAF5 88 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 FIBINQ8TAL6 211 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 TEKT1Q969V4 418 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 FAM46BQ96A09 425 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 MRPL24Q96A35 216 aaKnown RBP3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 RAB40CQ96S21 281 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 NUSAP1Q9BXS6 441 aaKnown RBP3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 ALDH8A1Q9H2A2 487 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 FBXL5Q9UKA1 691 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 MGAT4AQ9UM21 535 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 CPQQ9Y646 472 aa3.33□□□□□ -1.88
HMGB1P49-201ENST00000418882 FOXI3A8MTJ6 420 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 A8MU10 97 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 OR6A2O95222 327 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 GIG44P09565 113 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 C8orf89P0DMQ9 161 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 B4GALT1P15291 398 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 FOSL2P15408 326 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 AZU1P20160 251 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 SPRP35270 261 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 MTIF2P46199 727 aaKnown RBP3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 CCR4P51679 360 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 ST8SIA6P61647 398 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 Q1RN00 199 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 C17orf58Q2M2W7 97 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 WDR25Q64LD2 544 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 CYP4V2Q6ZWL3 525 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 NAXDQ8IW45 347 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 SYCP3Q8IZU3 236 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 NKAIN3Q8N8D7 197 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 GGHQ92820 318 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 PNPLA2Q96AD5 504 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 AP2M1Q96CW1 435 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms