RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 OR4C11Q6IEV9 310 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 SCIMPQ6UWF3 145 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 COMMD6Q7Z4G1 85 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 NUDT13Q86X67 352 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 HPS6Q86YV9 775 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 CPSF7Q8N684 471 aaKnown RBP9.52□□□□□ -0.89
HDLBP-206ENST00000417540 B3GNT7Q8NFL0 401 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 SLC2A12Q8TD20 617 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 ADAMTS18Q8TE60 1221 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 AGAP11Q8TF27 550 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 PTPMT1Q8WUK0 201 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-206ENST00000417540 MTBPQ96DY7 904 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 SCMH1Q96GD3 660 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 SEC16BQ96JE7 1060 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 FRMD6Q96NE9 622 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 FRG2BQ96QU4 278 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 BARD1Q99728 777 aaKnown RBP9.52□□□□□ -0.89
HDLBP-206ENST00000417540 MECRQ9BV79 373 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 NPLQ9BXD5 320 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-206ENST00000417540 C1QTNF3Q9BXJ4 246 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 EBPLQ9BY08 206 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 OR8D2Q9GZM6 311 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 TSPYL1Q9H0U9 437 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 LYRM4Q9HD34 91 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 ASB4Q9Y574 426 aa9.52□□□□□ -0.89
HDLBP-206ENST00000417540 COPG1Q9Y678 874 aaKnown RBP9.52□□□□□ -0.89
HDLBP-206ENST00000417540 SPTBN1Q01082 2364 aaKnown RBP9.52□□□□□ -0.89
HDLBP-206ENST00000417540 DIDO1Q9BTC0 2240 aaKnown RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 NCOA6Q14686 2063 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 TEX15Q9BXT5 2789 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 A0A088AWK7 358 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 TRAV17A0A0B4J275 112 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ANKUB1A6NFN9 424 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 C17orf105B2RV13 164 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 WWP2O00308 870 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 PCDH17O14917 1159 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF500O60304 480 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 PLIN3O60664 434 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 UGDHO60701 494 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 GLRA3O75311 464 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 SUPT7LO94864 414 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 CBX6O95503 412 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 IFNA16P05015 189 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 COL6A2P12110 1019 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF10P21506 573 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 IL10P22301 178 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 CD96P40200 585 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 PIK3CBP42338 1070 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 HSD17B7P56937 341 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 MLF1P58340 268 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 HERVK_113P63132 956 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 IGLV3-21P80748 117 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 HMGCS1Q01581 520 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 CLCQ05315 142 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 TBL3Q12788 808 aaKnown RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 DUSP8Q13202 625 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 LTB4RQ15722 352 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 HIST2H2ACQ16777 129 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 MEP1AQ16819 746 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 TMEM35AQ53FP2 167 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 RNFT1Q5M7Z0 435 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 C1QL3Q5VWW1 255 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF324BQ6AW86 544 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 HIST2H2AA3Q6FI13 130 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 FAM180AQ6UWF9 173 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ZYG11AQ6WRX3 759 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 GALNTL5Q7Z4T8 443 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF595Q8IYB9 648 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ZCCHC7Q8N3Z6 543 aaKnown RBP9.51□□□□□ -0.89
HDLBP-206ENST00000417540 FAM26EQ8N5C1 309 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 SIMC1Q8NDZ2 872 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 PRR7Q8TB68 274 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 UBE2E3Q969T4 207 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ATP6V1E2Q96A05 226 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 VMP1Q96GC9 406 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 VPS50Q96JG6 964 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF382Q96SR6 550 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 TBCDQ9BTW9 1192 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ERVK-6Q9BXR3 956 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 SLC29A3Q9BZD2 475 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 ACPTQ9BZG2 426 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 RNF32Q9H0A6 362 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 DEPPQ9NTK1 212 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 OLAHQ9NV23 265 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 TRPS1Q9UHF7 1281 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 SH3BGRL2Q9UJC5 107 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 SLC12A4Q9UP95 1085 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 DTX4Q9Y2E6 619 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 TIMM22Q9Y584 194 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 HRH3Q9Y5N1 445 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 POLEQ07864 2286 aa9.51□□□□□ -0.89
HDLBP-206ENST00000417540 KIAA1549Q9HCM3 1950 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF407Q9C0G0 2248 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 TMEM233B4DJY2 109 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 MANBAO00462 879 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SPAG7O75391 227 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 NME6O75414 186 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ITGA10O75578 1167 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SLC25A12O75746 678 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 OR6B1O95007 311 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms