RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RGS14O43566 566 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 SEC24DO94855 1032 aaPredicted RBP21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 SERPINA7P05543 415 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 HNRNPFP52597 415 aaKnown RBP21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 TRA2BP62995 288 aaKnown RBP21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 SH2D4BQ5SQS7 431 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 KANK2Q63ZY3 851 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 PAPD4Q6PIY7 484 aaKnown RBP21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 RNF165Q6ZSG1 346 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 KIRREL3Q8IZU9 778 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 FDCSPQ8NFU4 85 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 MLXIPLQ9NP71 852 aa21.66■■□□□ 1.06
SMARCB1-205ENST00000417137 A0A1W2PR48 441 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 HMGB1P1B2RPK0 211 aaPredicted RBP21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 MASP2O00187 686 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 RSL1D1O76021 490 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 NR2F6P10588 404 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 PGDP52209 483 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 ABCE1P61221 599 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 BTKQ06187 659 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 STX3Q13277 289 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 BTBD16Q32M84 506 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 LACTB2Q53H82 288 aaPredicted RBP21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 FAM219BQ5XKK7 198 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 C18orf63Q68DL7 685 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 PLAG1Q6DJT9 500 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 JMJD6Q6NYC1 403 aaPredicted RBP21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 CLNKQ7Z7G1 428 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 TRIM42Q8IWZ5 723 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 M1APQ8TC57 530 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 MGARPQ8TDB4 240 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 METTL2AQ96IZ6 378 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 ALOXE3Q9BYJ1 711 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 PFDN4Q9NQP4 134 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 SIRT5Q9NXA8 310 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 MCM8Q9UJA3 840 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 ZNF451Q9Y4E5 1061 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 DNAJC15Q9Y5T4 150 aa21.65■■□□□ 1.06
SMARCB1-205ENST00000417137 MYO1DO94832 1006 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 IFNA16P05015 189 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 PRR35P0CG20 571 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 BGNP21810 368 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 WDR4P57081 412 aaKnown RBP21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 Q0VFX4 171 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 VWA5B1Q5TIE3 1220 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 AGAP7PQ5VUJ5 663 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 HPS6Q86YV9 775 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 FAM76AQ8TAV0 307 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 APIPQ96GX9 242 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 AGAP4Q96P64 663 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 CCT7Q99832 543 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 WDR77Q9BQA1 342 aaPredicted RBP21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 FAIM2Q9BWQ8 316 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 ILKAPQ9H0C8 392 aaPredicted RBP21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 PNO1Q9NRX1 252 aaKnown RBP21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 C5AR2Q9P296 337 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 MGAQ8IWI9 3026 aa21.64■■□□□ 1.05
SMARCB1-205ENST00000417137 UQCRHLA0A096LP55 91 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 GNG14A0A1W2PPG7 69 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 PCDH7O60245 1069 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 LDB3O75112 727 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 UQCRHP07919 91 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 GSTM5P46439 218 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 SLC1A6P48664 564 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 RAPSNQ13702 412 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 TERF2Q15554 542 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 NDUFAF5Q5TEU4 345 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 OR52E8Q6IFG1 317 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 GALNT18Q6P9A2 607 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 ASB18Q6ZVZ8 466 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 DDIASQ8IXT1 998 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 TMEM132CQ8N3T6 1108 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 AGR3Q8TD06 166 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 TWIST2Q8WVJ9 160 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 ANKRD9Q96BM1 317 aaPredicted RBP21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 SMAD5Q99717 465 aaKnown RBP21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 NUDT9Q9BW91 350 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 ADAP2Q9NPF8 381 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 ZNF71Q9NQZ8 489 aaPredicted RBP21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 VTI1BQ9UEU0 232 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 ZDHHC2Q9UIJ5 367 aa21.63■■□□□ 1.05
SMARCB1-205ENST00000417137 SAGE2PA6NJ88 616 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 A8MUA0 341 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 SEC22BO75396 215 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 GPR75O95800 540 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 AIFM1O95831 613 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 LINC00032P0C843 101 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 TNNI3P19429 210 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 TIA1P31483 386 aaKnown RBP eCLIP21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 ELAVL1Q15717 326 aaKnown RBP21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 UGT3A2Q3SY77 523 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 TTMPQ5BVD1 217 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 ATG16L1Q676U5 607 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 RAB3IL1Q8TBN0 382 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 TM9SF4Q92544 642 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 DAZLQ92904 295 aaKnown RBP21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 TM4SF18Q96CE8 201 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 RBM18Q96H35 190 aaKnown RBP21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 ZNF552Q9H707 407 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms