RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 L3MBTL4Q8NA19 623 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 POGLUT1Q8NBL1 392 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 OR14A16Q8NHC5 309 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 C16orf52Q8NHV5 167 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ACTR8Q9H981 624 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 DMRT3Q9NQL9 472 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 SUCOQ9UBS9 1254 aaKnown RBP16.61■□□□□ 0.25
CPNE1-210ENST00000416778 SH3BGRL2Q9UJC5 107 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ENTPD4Q9Y227 616 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 KLF13Q9Y2Y9 288 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-210ENST00000416778 RNF11Q9Y3C5 154 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ATG4BQ9Y4P1 393 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 WASHC1A8K0Z3 465 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 C17orf105B2RV13 164 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 PLPP1O14494 284 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 PROM1O43490 865 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 ACSL3O95573 720 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 SSR2P43308 183 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 MEOX1P50221 254 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 NEK2P51955 445 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 CASP6P55212 293 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 RPS13P62277 151 aaKnown RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 RNF4P78317 190 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 BIKQ13323 160 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 DDX39BQ13838 428 aaKnown RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 CPSF6Q16630 551 aaKnown RBP eCLIP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 TECRLQ5HYJ1 363 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 C18orf63Q68DL7 685 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 GPR180Q86V85 440 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 CYP4Z2PQ8N1L4 340 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 ZCCHC7Q8N3Z6 543 aaKnown RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 ZNF808Q8N4W9 903 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 ZFP62Q8NB50 900 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 OR8K3Q8NH51 312 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 WDR20Q8TBZ3 569 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 ZNF721Q8TF20 911 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 TANKQ92844 425 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 ZNF717Q9BY31 904 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 OR8D2Q9GZM6 311 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 RPF2Q9H7B2 306 aaKnown RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 MS4A12Q9NXJ0 267 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 CPSF2Q9P2I0 782 aaKnown RBP16.6■□□□□ 0.25
CPNE1-210ENST00000416778 TINAGQ9UJW2 476 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 ASB4Q9Y574 426 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 SPACA6W5XKT8 324 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 LRBAP50851 2863 aa16.6■□□□□ 0.25
CPNE1-210ENST00000416778 PCNX1Q96RV3 2341 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 WWP2O00308 870 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 FOXE1O00358 373 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 OR7A17O14581 309 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 FGF17O60258 216 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 OR6B1O95007 311 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 INHBAP08476 426 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 RBP1P09455 135 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 ZNF24P17028 368 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 BSGP35613 385 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 HK2P52789 917 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 ADORA2A-AS1P86434 159 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 HSF1Q00613 529 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 CUL3Q13618 768 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 MRM1Q6IN84 353 aaKnown RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 IL20RBQ6UXL0 311 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 BNC2Q6ZN30 1099 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 DOLPP1Q86YN1 238 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 MYLK4Q86YV6 388 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 GPALPP1Q8IXQ4 340 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 GHDCQ8N2G8 530 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 SLC2A12Q8TD20 617 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 PPWD1Q96BP3 646 aaKnown RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 SENP5Q96HI0 755 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 FMO2Q99518 471 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 NOL11Q9H8H0 719 aaKnown RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 DDX31Q9H8H2 851 aaKnown RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 PRM3Q9NNZ6 103 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 TIMMDC1Q9NPL8 285 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 DEPPQ9NTK1 212 aa16.59■□□□□ 0.25
CPNE1-210ENST00000416778 KLF2Q9Y5W3 355 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-210ENST00000416778 PRSS44E7EML9 344 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 ZNF354AO60765 605 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-210ENST00000416778 EEDO75530 441 aaKnown RBP16.58■□□□□ 0.24
CPNE1-210ENST00000416778 CLDN9O95484 217 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 TUBB4AP04350 444 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 CTAGE8P0CG41 777 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 ESRRAP11474 423 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-210ENST00000416778 COL6A2P12110 1019 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 GRNP28799 593 aaKnown RBP16.58■□□□□ 0.24
CPNE1-210ENST00000416778 PTGER1P34995 402 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 RFC3P40938 356 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 STT3AP46977 705 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 SERPINB9P50453 376 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 RAP1GDS1P52306 607 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 HNRNPH2P55795 449 aaKnown RBP16.58■□□□□ 0.24
CPNE1-210ENST00000416778 XKRXQ6PP77 449 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 RPTNQ6XPR3 784 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 DGAT2L6Q6ZPD8 337 aa16.58■□□□□ 0.24
CPNE1-210ENST00000416778 CTAGE4Q8IX94 777 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms