RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 OR8D2Q9GZM6 311 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 EHD1Q9H4M9 534 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 ACKR4Q9NPB9 350 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 PRDM7Q9NQW5 492 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 SLC17A6Q9P2U8 582 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 SPRR3Q9UBC9 169 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 OARD1Q9Y530 152 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 DNHD1Q96M86 4753 aa14.21□□□□□ -0.13
DDX56-202ENST00000415758 NCKAP5O14513 1909 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 ANKDD1BA6NHY2 528 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 C17orf105B2RV13 164 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 GDF5P43026 501 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 DGKQP52824 942 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 SNTB1Q13884 538 aaKnown RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 SLBPQ14493 270 aaKnown RBP eCLIP14.2□□□□□ -0.14
DDX56-202ENST00000415758 MSS51Q4VC12 460 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 SLC22A10Q63ZE4 541 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 LRRC25Q8N386 305 aaPredicted RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 FBXW8Q8N3Y1 598 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 RELL2Q8NC24 303 aaPredicted RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 NUBPLQ8TB37 319 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 PAQR8Q8TEZ7 354 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 GRK7Q8WTQ7 553 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 CCT6BQ92526 530 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 SLCO2A1Q92959 643 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 RHBDF1Q96CC6 855 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 PBKQ96KB5 322 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 ZNF703Q9H7S9 590 aaPredicted RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 LYRM4Q9HD34 91 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 RYDENQ9NUL5 291 aaKnown RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 QPCTLQ9NXS2 382 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 ALKBH4Q9NXW9 302 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 GPRC5BQ9NZH0 403 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 FOXD3Q9UJU5 478 aaPredicted RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 ZNF490Q9ULM2 529 aaPredicted RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 CBLCQ9ULV8 474 aa14.2□□□□□ -0.14
DDX56-202ENST00000415758 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.2□□□□□ -0.14
DDX56-202ENST00000415758 BANF1O75531 89 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 WDR47O94967 919 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 ETHE1O95571 254 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 EPPINO95925 133 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 TNNI3P19429 210 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 CERS1P27544 350 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 UQCRC1P31930 480 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 CEACAM8P31997 349 aaPredicted RBP14.19□□□□□ -0.14
DDX56-202ENST00000415758 PIGAP37287 484 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 FNTAP49354 379 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 ASCL1P50553 236 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 POMZP3Q6PJE2 187 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 PAMR1Q6UXH9 720 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 ADAMTSL2Q86TH1 951 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 BIVMQ86UB2 503 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 ULK2Q8IYT8 1036 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 SLC15A4Q8N697 577 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 RNASE6Q93091 150 aaKnown RBP14.19□□□□□ -0.14
DDX56-202ENST00000415758 LRRC46Q96FV0 321 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 MS4A14Q96JA4 679 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 PWWP2AQ96N64 755 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 NAP1L3Q99457 506 aaPredicted RBP14.19□□□□□ -0.14
DDX56-202ENST00000415758 EGFL8Q99944 293 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 EXO5Q9H790 373 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 ZFP64Q9NPA5 681 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 PPANQ9NQ55 473 aaKnown RBP14.19□□□□□ -0.14
DDX56-202ENST00000415758 ZNF629Q9UEG4 869 aaPredicted RBP14.19□□□□□ -0.14
DDX56-202ENST00000415758 NINQ8N4C6 2090 aa14.19□□□□□ -0.14
DDX56-202ENST00000415758 FREM3P0C091 2139 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 MYOCOSA0A1B0GUC4 107 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 NPEPPSL1A6NEC2 478 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 AHRRA9YTQ3 701 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 DVL2O14641 736 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 DNALI1O14645 258 aaPredicted RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 PRAMEF4O60810 478 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 LDB3O75112 727 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 RAF1P04049 648 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 IGKV3-11P04433 115 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 RFPL3SP0C7P2 107 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 TIMP3P35625 211 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 GGT5P36269 586 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 IGLV3-21P80748 117 aaPredicted RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 TGM3Q08188 693 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 ASPHQ12797 758 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 FRG1Q14331 258 aaKnown RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 C18orf21Q32NC0 220 aaPredicted RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 PRAMEF9Q5VWM5 478 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 LYPD8Q6UX82 237 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 GAS2L3Q86XJ1 694 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 DND1Q8IYX4 353 aaKnown RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 SRFBP1Q8NEF9 429 aaKnown RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 NEIL3Q8TAT5 605 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 SREK1Q8WXA9 508 aaKnown RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 ANKRD9Q96BM1 317 aaPredicted RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 WDR34Q96EX3 536 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 ROGDIQ9GZN7 287 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 COPS7BQ9H9Q2 264 aaPredicted RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 PROK2Q9HC23 129 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 DMRT3Q9NQL9 472 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 COPS7AQ9UBW8 275 aa14.18□□□□□ -0.14
DDX56-202ENST00000415758 BOKQ9UMX3 212 aaPredicted RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 NSD1Q96L73 2696 aaPredicted RBP14.18□□□□□ -0.14
DDX56-202ENST00000415758 A0A1B0GTL3 188 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms