RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PIGGQ5H8A4 983 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 STEAP4Q687X5 459 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 TRIM40Q6P9F5 258 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 OPN5Q6U736 354 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 WDR53Q7Z5U6 358 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 UBE3DQ7Z6J8 389 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 CDC20BQ86Y33 519 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 LRRC25Q8N386 305 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 NKAPQ8N5F7 415 aaKnown RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 NAXEQ8NCW5 288 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 OR5L2Q8NGL0 311 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 NUBPLQ8TB37 319 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 PAQR8Q8TEZ7 354 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 ANKRD49Q8WVL7 239 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 SREK1Q8WXA9 508 aaKnown RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 WDR34Q96EX3 536 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 RMND5BQ96G75 393 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 PBKQ96KB5 322 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 NSD1Q96L73 2696 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 TMEM79Q9BSE2 394 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 MCMBPQ9BTE3 642 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 OR8D2Q9GZM6 311 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 EHD1Q9H4M9 534 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 PROK2Q9HC23 129 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 LYRM4Q9HD34 91 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 ACKR4Q9NPB9 350 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 PRDM7Q9NQW5 492 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 GPRC5BQ9NZH0 403 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF490Q9ULM2 529 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 PSAT1Q9Y617 370 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 C17orf105B2RV13 164 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 TAPBPO15533 448 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 WDR47O94967 919 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 SCELO95171 688 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 WISP3O95389 354 aaPredicted RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 P04436 131 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 DNASE1P24855 282 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 CEACAM8P31997 349 aaPredicted RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 GGT5P36269 586 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 PIGAP37287 484 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 TAS2R39P59534 338 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 IGLV3-21P80748 117 aaPredicted RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 SERTAD2Q14140 314 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 E2F2Q14209 437 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 RCN2Q14257 317 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 FRG1Q14331 258 aaKnown RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF460Q14592 562 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 DAZAP2Q15038 168 aaPredicted RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 TSNQ15631 228 aaKnown RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 FLYWCH1Q4VC44 716 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 PAMR1Q6UXH9 720 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 ADAMTSL2Q86TH1 951 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 ZC3HC1Q86WB0 502 aaKnown RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 C9orf40Q8IXQ3 194 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 ULK2Q8IYT8 1036 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 KRT78Q8N1N4 520 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 CCT6BQ92526 530 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 KIAA1191Q96A73 305 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 ANKRD9Q96BM1 317 aaPredicted RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 EGFL8Q99944 293 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 DMRT3Q9NQL9 472 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 TRMT1Q9NXH9 659 aaKnown RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 QPCTLQ9NXS2 382 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 CBLCQ9ULV8 474 aa11.21□□□□□ -0.61
LIMS2-210ENST00000413578 CHCHD2Q9Y6H1 151 aaPredicted RBP11.21□□□□□ -0.61
LIMS2-210ENST00000413578 HSPB2A8KAH6 182 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 KDM4EB2RXH2 506 aaPredicted RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 PGRMC1O00264 195 aaKnown RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 LDB3O75112 727 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 H2AFYO75367 372 aaKnown RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 ATE1O95260 518 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 EPORP19235 508 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 HPDP32754 393 aaPredicted RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 ELK3P41970 407 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 ASPHQ12797 758 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 STX4Q12846 297 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 TGFBIQ15582 683 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 HSPB2Q16082 182 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 CAMKMTQ7Z624 323 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 FBXW8Q8N3Y1 598 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 ACTRT1Q8TDG2 376 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 GRK7Q8WTQ7 553 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 FAM222BQ8WU58 562 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 SPACA9Q96E40 222 aaPredicted RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 SENP5Q96HI0 755 aaPredicted RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 PWWP2AQ96N64 755 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 F2RL3Q96RI0 385 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 MAPKAP1Q9BPZ7 522 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 LDAHQ9H6V9 325 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 ZFP64Q9NPA5 681 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 PPANQ9NQ55 473 aaKnown RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 JRKLQ9Y4A0 524 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 TEX264Q9Y6I9 313 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.2□□□□□ -0.62
LIMS2-210ENST00000413578 FBN3Q75N90 2809 aa11.2□□□□□ -0.62
LIMS2-210ENST00000413578 FAM95CA0A1B0GW59 222 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 ANKDD1BA6NHY2 528 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 FGF17O60258 216 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms