RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 UPP2O95045 317 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 PNPP00491 289 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 LRP8Q14114 963 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 GANABQ14697 944 aaKnown RBP12.43□□□□□ -0.42
COL6A3-206ENST00000409809 SLC35B2Q8TB61 432 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 OR11A1Q9GZK7 315 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 LOC285095A0A1B0GVY8 99 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 CD3GP09693 182 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 AMY2BP19961 511 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL6A3-206ENST00000409809 SLX4IPQ5VYV7 408 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 TPRA1Q86W33 373 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 ACBD7Q8N6N7 88 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 OR52E4Q8NGH9 312 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 OR56A3Q8NH54 315 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 NTAN1Q96AB6 310 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 HS6ST2Q96MM7 605 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 FTHL17Q9BXU8 183 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 AMBNQ9NP70 447 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 IL20Q9NYY1 176 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 NLKQ9UBE8 527 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 ADAMTS6Q9UKP5 1117 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 CDC14AQ9UNH5 594 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 CASC3O15234 703 aaKnown RBP12.43□□□□□ -0.42
COL6A3-206ENST00000409809 SPDEFO95238 335 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 CELP19835 753 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 CYP2B6P20813 491 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 MAOBP27338 520 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 CAP1Q01518 475 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 CNTN2Q02246 1040 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 ATXN7L3Q14CW9 347 aaPredicted RBP12.43□□□□□ -0.42
COL6A3-206ENST00000409809 RAB11BQ15907 218 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 LHPPQ9H008 270 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 TIMM22Q9Y584 194 aa12.43□□□□□ -0.42
COL6A3-206ENST00000409809 PARP4Q9UKK3 1724 aaKnown RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 J3QLW9 94 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 MFSD11O43934 449 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 HLA-HP01893 362 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 ZNF19P17023 458 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 RRAS2P62070 204 aaPredicted RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 TIGD3Q6B0B8 471 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 OR4Q3Q8NH05 313 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 FDXACB1Q9BRP7 624 aaPredicted RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 B3GNT5Q9BYG0 378 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 PHPT1Q9NRX4 125 aaPredicted RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 E7EQ34 232 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 GOSR2O14653 212 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 PAX6P26367 422 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 PLPPR4Q7Z2D5 763 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 KIAA1191Q96A73 305 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 DHDHQ9UQ10 334 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 C2orf92A0A1B0GVN3 265 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 OR4F21O95013 312 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 HSPA7P48741 367 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 RAP1GAP2Q684P5 730 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 SERINC1Q9NRX5 453 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 SLC6A5Q9Y345 797 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 NDUFS1P28331 727 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 MAGEB1P43366 347 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 ZNF792Q3KQV3 632 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 ACTBL2Q562R1 376 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 UBE2NLQ5JXB2 153 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 CLEC12AQ5QGZ9 265 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 PROKR1Q8TCW9 393 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 TMEM41AQ96HV5 264 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 CILPO75339 1184 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 JRKO75564 520 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 ADH1CP00326 375 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 OAS1P00973 400 aaKnown RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 CTSEP14091 401 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 CSNK2A2P19784 350 aaPredicted RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 RAB35Q15286 201 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 RNF130Q86XS8 419 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 KCT2Q8NC54 265 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 KNTC1P50748 2209 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 A8MT66 165 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 DCNP07585 359 aaKnown RBP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 EBLN1P0CF75 366 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 THBS3P49746 956 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 NCBP2P52298 156 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL6A3-206ENST00000409809 TAS2R30P59541 319 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 CEACAM19Q7Z692 300 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 IRF2BP1Q8IU81 584 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 DHRS9Q9BPW9 319 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 KLHL13Q9P2N7 655 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 UGT2A1Q9Y4X1 527 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 WIF1Q9Y5W5 379 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 SPATA31A1Q5TZJ5 1347 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 FAM170BA6NMN3 283 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 LAS2Q8IYD9 372 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 RHOXF1Q8NHV9 184 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 FCRL5Q96RD9 977 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 CNTNAP3Q9BZ76 1288 aa12.42□□□□□ -0.42
COL6A3-206ENST00000409809 WNT4P56705 351 aa12.41□□□□□ -0.42
COL6A3-206ENST00000409809 MC1RQ01726 317 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms